RNA id: TU37720



Basic Information


Item Value
RNA id TU37720
length 226
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G30158
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 51379568 ~ 51379793 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tctttggtcttggccatggtggagggtttggaatctgattgattgattgcttctgtggacaggtgtcttttatacaggtaaaaAGCTGAGAAttggagcactccctttaagagagtgctcctaatctcagctcgttacctgtataaaagacacatgggagccagaaatcttgctgattgataggggatcaaatacttatttccctcattgacatgcaaatcaattt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37703 lncRNA upstream 201185 51178179 ~ 51178383 (+) True G30146
TU37694 lncRNA upstream 310861 51068140 ~ 51068707 (+) True G30139
TU37686 lncRNA upstream 369499 51006377 ~ 51010069 (+) True G30132
TU37656 lncRNA upstream 581249 50798120 ~ 50798319 (+) True G30104
TU37654 lncRNA upstream 587278 50792075 ~ 50792290 (+) True G30102
TU37726 lncRNA downstream 40854 51420647 ~ 51423538 (+) True G30164
TU37727 lncRNA downstream 44870 51424663 ~ 51424950 (+) True G30165
TU37731 lncRNA downstream 61560 51441353 ~ 51441568 (+) True G30169
TU37736 lncRNA downstream 84731 51464524 ~ 51466267 (+) True G30174
TU37760 lncRNA downstream 135682 51515475 ~ 51515731 (+) True G30195
AMCG00008304 mRNA upstream 42883 51333303 ~ 51336685 (+) True AMCG00008304
AMCG00008296 mRNA upstream 797385 50562754 ~ 50582183 (+) True AMCG00008296
AMCG00008294 mRNA upstream 919514 50451310 ~ 50460054 (+) True AMCG00008294
AMCG00008292 mRNA upstream 975610 50366444 ~ 50403958 (+) True AMCG00008292
AMCG00008291 mRNA upstream 1019703 50358987 ~ 50359865 (+) True AMCG00008291
AMCG00008309 mRNA downstream 155677 51535470 ~ 51542896 (+) True AMCG00008309
AMCG00008308 mRNA downstream 172813 51552606 ~ 51560087 (+) True AMCG00008308
AMCG00008310 mRNA downstream 272571 51652364 ~ 51657000 (+) True AMCG00008310
AMCG00008316 mRNA downstream 886640 52266433 ~ 52311801 (+) True AMCG00008316
AMCG00008320 mRNA downstream 932096 52311889 ~ 52315183 (+) True AMCG00008320
TU37559 other upstream 1026774 50351527 ~ 50352794 (+) False AMCG00008288
TU37330 other upstream 1960822 49404856 ~ 49418746 (+) True AMCG00008271
TU37226 other upstream 2208551 49163816 ~ 49171017 (+) True AMCG00008263
TU36912 other upstream 3463311 47913868 ~ 47916257 (+) False AMCG00008241
TU36904 other upstream 3488885 47889027 ~ 47890683 (+) False AMCG00008242
TU37728 other downstream 46788 51426581 ~ 51428055 (+) True G30166
TU37800 other downstream 720969 52100762 ~ 52101524 (+) True G30232
TU37873 other downstream 998536 52378329 ~ 52378776 (+) True G30299
TU37877 other downstream 1001548 52381341 ~ 52382418 (+) True G30300

Expression Profile