RNA id: TU37731



Basic Information


Item Value
RNA id TU37731
length 216
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G30169
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 51441353 ~ 51441568 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgtgtgtgtgtgtgtgtgtgtgcattaggAAGAATGATATAAATGaccaaaaacaggaaaataaataaataaataaaaaactcacCCATACCTACCCAGAATTTCGCACAATCTCGACAGATTTTCCCCGAATGagagatttttttctctccacgtTAAGTGAATGTAGTTATGCAGCCCGTGTCTTCAGTAGTTGAGCACAGAGTTGCATGTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37727 lncRNA upstream 16403 51424663 ~ 51424950 (+) True G30165
TU37726 lncRNA upstream 17815 51420647 ~ 51423538 (+) True G30164
TU37720 lncRNA upstream 61560 51379568 ~ 51379793 (+) True G30158
TU37703 lncRNA upstream 262970 51178179 ~ 51178383 (+) True G30146
TU37694 lncRNA upstream 372646 51068140 ~ 51068707 (+) True G30139
TU37736 lncRNA downstream 22956 51464524 ~ 51466267 (+) True G30174
TU37760 lncRNA downstream 73907 51515475 ~ 51515731 (+) True G30195
TU37771 lncRNA downstream 122545 51564113 ~ 51571558 (+) True G30205
TU37772 lncRNA downstream 129154 51570722 ~ 51587545 (+) True G30206
TU37787 lncRNA downstream 347342 51788910 ~ 51789147 (+) True G30219
AMCG00008304 mRNA upstream 104668 51333303 ~ 51336685 (+) True AMCG00008304
AMCG00008296 mRNA upstream 859170 50562754 ~ 50582183 (+) True AMCG00008296
AMCG00008294 mRNA upstream 981299 50451310 ~ 50460054 (+) True AMCG00008294
AMCG00008292 mRNA upstream 1037395 50366444 ~ 50403958 (+) True AMCG00008292
AMCG00008291 mRNA upstream 1081488 50358987 ~ 50359865 (+) True AMCG00008291
AMCG00008309 mRNA downstream 93902 51535470 ~ 51542896 (+) True AMCG00008309
AMCG00008308 mRNA downstream 111038 51552606 ~ 51560087 (+) True AMCG00008308
AMCG00008310 mRNA downstream 210796 51652364 ~ 51657000 (+) True AMCG00008310
AMCG00008316 mRNA downstream 824865 52266433 ~ 52311801 (+) True AMCG00008316
AMCG00008320 mRNA downstream 870321 52311889 ~ 52315183 (+) True AMCG00008320
TU37728 other upstream 13298 51426581 ~ 51428055 (+) True G30166
TU37559 other upstream 1088559 50351527 ~ 50352794 (+) False AMCG00008288
TU37330 other upstream 2022607 49404856 ~ 49418746 (+) True AMCG00008271
TU37226 other upstream 2270336 49163816 ~ 49171017 (+) True AMCG00008263
TU36912 other upstream 3525096 47913868 ~ 47916257 (+) False AMCG00008241
TU37800 other downstream 659194 52100762 ~ 52101524 (+) True G30232
TU37873 other downstream 936761 52378329 ~ 52378776 (+) True G30299
TU37877 other downstream 939773 52381341 ~ 52382418 (+) True G30300

Expression Profile