RNA id: TU37840



Basic Information


Item Value
RNA id TU37840
length 234
lncRNA type intronic
GC content 0.38
exon number 1
gene id G30270
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 52288890 ~ 52289123 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtttattttaaagctccGTCGAGTGATAGACAGGTGTCGAGCTGTGCGCCGATCAGGAAGGAGCAGACACATCCAGATTGTGGtggggtttgtttcttttatattgatttgttgTGGCTTTATTTGATTTATCTTGCTTGATTTGTGTTCATATTGGTTGTTTATATGGGGATTATTGTATTGGTTTTATGCATCTGTTGGATGACatctgatttaatgttttcttgatTTGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37836 lncRNA downstream 9771 52278857 ~ 52279119 (-) True G30266
TU37805 lncRNA downstream 131811 52156790 ~ 52157079 (-) True G30237
TU37801 lncRNA downstream 187570 52101040 ~ 52101320 (-) True G30233
TU37799 lncRNA downstream 195235 52091632 ~ 52093655 (-) True G30231
TU37796 lncRNA downstream 221434 52067208 ~ 52067456 (-) True G30228
TU37845 lncRNA upstream 36582 52325705 ~ 52326037 (-) True G30275
TU37846 lncRNA upstream 37038 52326161 ~ 52326391 (-) True G30276
TU37855 lncRNA upstream 48360 52337483 ~ 52338366 (-) False AMCG00008318
TU37881 lncRNA upstream 91933 52381056 ~ 52381966 (-) False AMCG00008325
TU37882 lncRNA upstream 94350 52383473 ~ 52384567 (-) False AMCG00008325
AMCG00008314 mRNA downstream 38794 52189182 ~ 52250096 (-) True AMCG00008314
AMCG00008313 mRNA downstream 144163 52137169 ~ 52144727 (-) True AMCG00008313
AMCG00008312 mRNA downstream 219081 52068482 ~ 52069809 (-) True AMCG00008312
AMCG00008311 mRNA downstream 545092 51743409 ~ 51743798 (-) True AMCG00008311
AMCG00008307 mRNA downstream 773490 51510754 ~ 51515400 (-) True AMCG00008307
AMCG00008318 mRNA upstream 40113 52329236 ~ 52339097 (-) True AMCG00008318
AMCG00008321 mRNA upstream 55906 52345029 ~ 52345527 (-) True AMCG00008321
AMCG00008319 mRNA upstream 67378 52356501 ~ 52362043 (-) True AMCG00008319
AMCG00008317 mRNA upstream 77030 52366153 ~ 52370382 (-) True AMCG00008317
AMCG00008325 mRNA upstream 92566 52381689 ~ 52384302 (-) True AMCG00008325
TU37623 other downstream 1760854 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 2014707 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 2234788 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 2387939 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 4005677 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile