Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU72776 |
| length | 395 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G58215 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 43309860 ~ 43311062 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko00830 | Retinol metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72753 | lncRNA | upstream | 60219 | 43249403 ~ 43249641 (+) | True | G58195 |
| TU72734 | lncRNA | upstream | 96832 | 43212710 ~ 43213028 (+) | True | G58178 |
| TU72699 | lncRNA | upstream | 299810 | 43006624 ~ 43010050 (+) | True | G58148 |
| TU72700 | lncRNA | upstream | 299858 | 43006601 ~ 43010002 (+) | False | G58148 |
| TU72671 | lncRNA | upstream | 370986 | 42938007 ~ 42938874 (+) | True | G58123 |
| TU72773 | lncRNA | downstream | 7854 | 43318916 ~ 43324579 (+) | True | G58214 |
| TU72836 | lncRNA | downstream | 128337 | 43439399 ~ 43444317 (+) | False | AMCG00009647 |
| TU72871 | lncRNA | downstream | 367289 | 43678351 ~ 43680953 (+) | True | G58291 |
| TU72891 | lncRNA | downstream | 562719 | 43873781 ~ 43875723 (+) | True | G58304 |
| TU72908 | lncRNA | downstream | 598526 | 43909588 ~ 43915760 (+) | True | G58317 |
| AMCG00009635 | mRNA | upstream | 36488 | 43267927 ~ 43273372 (+) | True | AMCG00009635 |
| AMCG00009634 | mRNA | upstream | 42961 | 43258520 ~ 43266899 (+) | True | AMCG00009634 |
| AMCG00009639 | mRNA | upstream | 56798 | 43252202 ~ 43253062 (+) | True | AMCG00009639 |
| AMCG00009636 | mRNA | upstream | 95941 | 43189605 ~ 43213919 (+) | True | AMCG00009636 |
| AMCG00009633 | mRNA | upstream | 196910 | 43105479 ~ 43112950 (+) | True | AMCG00009633 |
| AMCG00009640 | mRNA | downstream | 4566 | 43315628 ~ 43318501 (+) | True | AMCG00009640 |
| AMCG00009646 | mRNA | downstream | 105769 | 43416831 ~ 43424850 (+) | True | AMCG00009646 |
| AMCG00009647 | mRNA | downstream | 125928 | 43436990 ~ 43444420 (+) | True | AMCG00009647 |
| AMCG00009656 | mRNA | downstream | 360707 | 43671769 ~ 43720150 (+) | True | AMCG00009656 |
| AMCG00009654 | mRNA | downstream | 425535 | 43736597 ~ 43740863 (+) | True | AMCG00009654 |
| TU72303 | other | upstream | 1231619 | 42036018 ~ 42078241 (+) | True | G57830 |
| TU72035 | other | upstream | 2315201 | 40990802 ~ 40994659 (+) | True | G57604 |
| TU71881 | other | upstream | 3204912 | 40102383 ~ 40104948 (+) | False | AMCG00009516 |
| TU71802 | other | upstream | 3360660 | 39948006 ~ 39949200 (+) | True | G57430 |
| TU71670 | other | upstream | 3872865 | 39434900 ~ 39436995 (+) | True | AMCG00009480 |
| TU72919 | other | downstream | 621890 | 43932952 ~ 43935762 (+) | True | G58324 |
| TU73161 | other | downstream | 1075435 | 44386497 ~ 44387964 (+) | False | G58522 |
| TU73232 | other | downstream | 1256303 | 44567365 ~ 44570531 (+) | True | AMCG00009694 |
| TU73244 | other | downstream | 1273500 | 44584562 ~ 44599328 (+) | False | AMCG00009700 |
| TU73251 | other | downstream | 1321688 | 44632750 ~ 44651967 (+) | True | G58600 |
