Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU73158 |
| length | 3051 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 3 |
| gene id | G58522 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 44386497 ~ 44407568 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0019538 | protein metabolic process | biological_process |
| GO:0043603 | cellular amide metabolic process | biological_process |
| GO:0043604 | amide biosynthetic process | biological_process |
| GO:1901564 | organonitrogen compound metabolic process | biological_process |
| GO:1901566 | organonitrogen compound biosynthetic process | biological_process |
| GO:0009058 | biosynthetic process | biological_process |
| GO:0009059 | macromolecule biosynthetic process | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:1901576 | organic substance biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0010467 | gene expression | biological_process |
| GO:0044237 | cellular metabolic process | biological_process |
| GO:0044238 | primary metabolic process | biological_process |
| GO:0044249 | cellular biosynthetic process | biological_process |
| GO:0044260 | cellular macromolecule metabolic process | biological_process |
| GO:0044267 | cellular protein metabolic process | biological_process |
| GO:0044271 | cellular nitrogen compound biosynthetic process | biological_process |
| GO:0071704 | organic substance metabolic process | biological_process |
| GO:0006518 | peptide metabolic process | biological_process |
| GO:0043170 | macromolecule metabolic process | biological_process |
| GO:0006807 | nitrogen compound metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU73145 | lncRNA | upstream | 26435 | 44328271 ~ 44360062 (+) | True | G58513 |
| TU73142 | lncRNA | upstream | 60924 | 44325151 ~ 44325573 (+) | True | G58510 |
| TU73083 | lncRNA | upstream | 216708 | 44169485 ~ 44169789 (+) | True | G58467 |
| TU72912 | lncRNA | upstream | 459866 | 43921474 ~ 43926631 (+) | True | G58319 |
| TU72908 | lncRNA | upstream | 470737 | 43909588 ~ 43915760 (+) | True | G58317 |
| TU73169 | lncRNA | downstream | 23190 | 44413272 ~ 44483247 (+) | True | G58527 |
| TU73281 | lncRNA | downstream | 369195 | 44759277 ~ 44760058 (+) | False | AMCG00009706 |
| TU73337 | lncRNA | downstream | 502763 | 44892845 ~ 44893078 (+) | True | G58666 |
| TU73326 | lncRNA | downstream | 527961 | 44918043 ~ 44921637 (+) | True | G58660 |
| TU73340 | lncRNA | downstream | 532002 | 44922084 ~ 44923700 (+) | True | G58668 |
| AMCG00009689 | mRNA | upstream | 325 | 44382557 ~ 44386172 (+) | True | AMCG00009689 |
| AMCG00009688 | mRNA | upstream | 5461 | 44373701 ~ 44381036 (+) | True | AMCG00009688 |
| AMCG00009685 | mRNA | upstream | 14082 | 44364531 ~ 44372415 (+) | True | AMCG00009685 |
| AMCG00009686 | mRNA | upstream | 63700 | 44314972 ~ 44322797 (+) | True | AMCG00009686 |
| AMCG00009687 | mRNA | upstream | 72348 | 44303226 ~ 44314149 (+) | True | AMCG00009687 |
| AMCG00009698 | mRNA | downstream | 49492 | 44439574 ~ 44442056 (+) | True | AMCG00009698 |
| AMCG00009696 | mRNA | downstream | 60021 | 44450103 ~ 44482061 (+) | True | AMCG00009696 |
| AMCG00009695 | mRNA | downstream | 93885 | 44483967 ~ 44490079 (+) | True | AMCG00009695 |
| AMCG00009699 | mRNA | downstream | 102613 | 44492695 ~ 44502439 (+) | True | AMCG00009699 |
| AMCG00009694 | mRNA | downstream | 171695 | 44561777 ~ 44567900 (+) | False | AMCG00009694 |
| TU72919 | other | upstream | 450735 | 43932952 ~ 43935762 (+) | True | G58324 |
| TU72303 | other | upstream | 2308256 | 42036018 ~ 42078241 (+) | True | G57830 |
| TU72035 | other | upstream | 3391838 | 40990802 ~ 40994659 (+) | True | G57604 |
| TU71881 | other | upstream | 4281549 | 40102383 ~ 40104948 (+) | False | AMCG00009516 |
| TU71802 | other | upstream | 4437297 | 39948006 ~ 39949200 (+) | True | G57430 |
| TU73232 | other | downstream | 177283 | 44567365 ~ 44570531 (+) | True | AMCG00009694 |
| TU73244 | other | downstream | 194480 | 44584562 ~ 44599328 (+) | False | AMCG00009700 |
| TU73251 | other | downstream | 242668 | 44632750 ~ 44651967 (+) | True | G58600 |
| TU73437 | other | downstream | 665983 | 45056065 ~ 45057874 (+) | True | G58747 |
| TU73602 | other | downstream | 1118112 | 45508194 ~ 45509104 (+) | False | AMCG00009761 |
