RNA id: TU204043


Basic Information

Item Value
RNA id TU204043
length 409
lncRNA type intronic
GC content 0.44
exon number 1
gene id G162042
representative True

Chromosome Information

Item Value
chromosome id PESF01000031.1
NCBI id PESF01000031.1
chromosome length 187035
location 117451 ~ 117859 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTACACTCACctgaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtccgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgtgccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggtgtgaaaagggaaaaacatccagtatgcggccaGTCCTGTgtgcgaaaatgccttgttgatgctaaaggtcagaggagaatgggccgattgattcaagctgatagaagagcaactttgac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU204042 lncRNA upstream 3574 113671 ~ 113877 (+) True G162041
TU204037 lncRNA upstream 20157 97049 ~ 97294 (+) True G162036
TU204035 lncRNA upstream 24363 92675 ~ 93088 (+) True G162034
TU204055 lncRNA downstream 52529 170388 ~ 170637 (+) True G162054
AMCG00014055 mRNA downstream 42137 159996 ~ 180569 (+) True AMCG00014055
TU204050 other downstream 41927 159786 ~ 160627 (+) True G162049

Expression Profile