RNA id: TU84399



Basic Information


Item Value
RNA id TU84399
length 281
lncRNA type read_through
GC content 0.55
exon number 2
gene id AMCG00014061
representative False

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 136864 ~ 247002 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATCCACAGTCCTCTCCTGATGCAGTAAAGACCCACACCAGTCACCAGaatCAGGACACAGAGCTGGTGAATTACGCTGCCCTGAAGTTCACTGCCAACAGAGCAGTGCATCCTGGGAGAAGGAGGCGAGAGACGGACCCACATGTGCTGTATGCTGATGTCAGAGCTCAGCAATGGGACTGAGCGCCCTAGGGGGTTAAACCCTGCAGTGACTGTGAGACAGGCCGGCCAGACCAGCTCCAGCCTCAGGACGCAAATGGGGTCAAATACCTATAAGCATAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84528 lncRNA downstream 554262 801264 ~ 801464 (+) True G67684
TU84529 lncRNA downstream 557535 804537 ~ 804746 (+) True G67685
TU84535 lncRNA downstream 734837 981839 ~ 1022813 (+) True G67690
TU84543 lncRNA downstream 1003097 1250099 ~ 1250314 (+) True G67698
TU84544 lncRNA downstream 1028989 1275991 ~ 1276216 (+) True G67699
AMCG00014062 mRNA upstream 10967 124143 ~ 136221 (+) True AMCG00014062
AMCG00014065 mRNA upstream 45256 97427 ~ 101932 (+) True AMCG00014065
AMCG00014068 mRNA downstream 5273 252275 ~ 257660 (+) True AMCG00014068
AMCG00014069 mRNA downstream 32128 279130 ~ 349175 (+) True AMCG00014069
AMCG00014071 mRNA downstream 132208 379210 ~ 386103 (+) True AMCG00014071
AMCG00014077 mRNA downstream 940557 1187559 ~ 1188536 (+) True AMCG00014077
AMCG00014083 mRNA downstream 987690 1234692 ~ 1244467 (+) True AMCG00014083
TU84388 other upstream 40066 58449 ~ 107122 (+) True G67577
TU84560 other downstream 1236783 1483785 ~ 1484093 (+) False AMCG00014099
TU84663 other downstream 1588430 1835432 ~ 1838125 (+) True AMCG00014104
TU84672 other downstream 1632089 1879091 ~ 1881041 (+) True G67801
TU84682 other downstream 1653218 1900220 ~ 1902615 (+) True AMCG00014111
TU84815 other downstream 1879870 2126872 ~ 2130145 (+) True G67896

Expression Profile