RNA id: AMCG00014124



Basic Information


Item Value
RNA id AMCG00014124
length 600
RNA type mRNA
GC content 0.55
exon number 3
gene id AMCG00014124
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2161757 ~ 2172540 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCAGCACCAACTCTACCAATGCAGCCGCGTATTGCAGAATAGACTCAGCTGGCAGCTGGCCTTGCTGTTGGAAAGTGAACCGCCGGAGATGGACCCTGTGTGTGGCGGCGAATTGTGCCTGGATTACAGTGACAGCCTCCACGTACGTGGTAGCAGGACCCAGGGTATCAAAGATGTGCTATCCCTCAGTTCCCAGGCAGTGCAGCAGCATTGCAGGTTTGCGGGCATCACTCACATCATCCAGACCAAGTGCAAGCAGATCCTTCTGTCAGTATTGCGTATCTCTAGCTCAGCGGGAAGAGCCAAGGCCGTGTCCACCTGCAGCTCACACCTGCTGGTCATCTCTGTGTTCTTCCTCACAACTGCAGGGGTCTTCATCTCCTACAGGATTCCTGGGACCTCAGTGGACAGCCGTGTTATGGGGTCTGTGATTCAGAATGTCTTCCCTGCCCTCATGAATCCGATCATCTACTGCCTGAGGACTAAAGAGATCAGGGACAGCTTGGCAAAAACACTGAACAAGAGCAGTATCTTCCCAGGCCTGCTACTCCAGGGCTCCCAGTGCCCTCTGCTCTGGGGCTTCCCGCGATGCTCCTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84819 lncRNA upstream 13103 2148449 ~ 2148654 (+) True G67899
TU84797 lncRNA upstream 84155 2077303 ~ 2077602 (+) True G67882
TU84650 lncRNA upstream 319312 1840165 ~ 1842445 (+) True G67789
TU84655 lncRNA upstream 339999 1820573 ~ 1821758 (+) True G67792
TU84544 lncRNA upstream 885541 1275991 ~ 1276216 (+) True G67699
TU84829 lncRNA downstream 160951 2333491 ~ 2333944 (+) True G67907
TU84830 lncRNA downstream 177589 2350129 ~ 2373305 (+) True G67908
TU84919 lncRNA downstream 573704 2746244 ~ 2755484 (+) True G67983
TU84927 lncRNA downstream 594962 2767502 ~ 2768837 (+) True G67988
TU84933 lncRNA downstream 609799 2782339 ~ 2802044 (+) True G67994
AMCG00014120 mRNA upstream 48391 2083426 ~ 2113366 (+) True AMCG00014120
AMCG00014113 mRNA upstream 133246 2024598 ~ 2028511 (+) True AMCG00014113
AMCG00014112 mRNA upstream 139491 2008602 ~ 2022266 (+) True AMCG00014112
AMCG00014106 mRNA upstream 236695 1921339 ~ 1925062 (+) True AMCG00014106
AMCG00014111 mRNA upstream 259070 1900462 ~ 1902687 (+) False AMCG00014111
AMCG00014122 mRNA downstream 7106 2179646 ~ 2195573 (+) True AMCG00014122
AMCG00014123 mRNA downstream 49075 2221615 ~ 2222904 (+) True AMCG00014123
AMCG00014121 mRNA downstream 67098 2239638 ~ 2253288 (+) True AMCG00014121
AMCG00014125 mRNA downstream 104169 2276709 ~ 2325390 (+) True AMCG00014125
AMCG00014139 mRNA downstream 205694 2378234 ~ 2389212 (+) True AMCG00014139
TU84815 other upstream 31612 2126872 ~ 2130145 (+) True G67896
TU84682 other upstream 259142 1900220 ~ 1902615 (+) True AMCG00014111
TU84672 other upstream 280716 1879091 ~ 1881041 (+) True G67801
TU84663 other upstream 323632 1835432 ~ 1838125 (+) True AMCG00014104
TU84560 other upstream 677664 1483785 ~ 1484093 (+) False AMCG00014099
TU84895 other downstream 534300 2706840 ~ 2710329 (+) False AMCG00014146
TU84896 other downstream 534300 2706840 ~ 2710329 (+) False AMCG00014146
TU84897 other downstream 534300 2706840 ~ 2710329 (+) False AMCG00014146
TU84898 other downstream 536484 2709024 ~ 2710329 (+) True AMCG00014146
TU85565 other downstream 2476660 4649200 ~ 4651964 (+) True G68475

Expression Profile