Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014309 |
| length | 969 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 10 |
| gene id | AMCG00014309 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 8478982 ~ 8507687 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K24200 | OCA2; P protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86247 | lncRNA | upstream | 342772 | 8133288 ~ 8136210 (+) | True | G69023 |
| TU86229 | lncRNA | upstream | 463979 | 8014744 ~ 8015003 (+) | True | G69006 |
| TU86203 | lncRNA | upstream | 604240 | 7874527 ~ 7874742 (+) | True | G68982 |
| TU86116 | lncRNA | upstream | 852578 | 7625988 ~ 7626404 (+) | True | G68904 |
| TU86061 | lncRNA | upstream | 1009672 | 7469078 ~ 7469310 (+) | False | AMCG00014272 |
| TU86463 | lncRNA | downstream | 226636 | 8734323 ~ 8735939 (+) | True | G69206 |
| TU86492 | lncRNA | downstream | 382899 | 8890586 ~ 8890834 (+) | True | G69232 |
| TU86614 | lncRNA | downstream | 858850 | 9366537 ~ 9376350 (+) | True | G69326 |
| TU86679 | lncRNA | downstream | 1393763 | 9901450 ~ 9910048 (+) | True | G69384 |
| TU86698 | lncRNA | downstream | 1466737 | 9974424 ~ 10028351 (+) | True | G69400 |
| AMCG00014308 | mRNA | upstream | 77623 | 8386165 ~ 8401359 (+) | True | AMCG00014308 |
| AMCG00014307 | mRNA | upstream | 96698 | 8343001 ~ 8382284 (+) | True | AMCG00014307 |
| AMCG00014306 | mRNA | upstream | 157243 | 8263436 ~ 8321739 (+) | True | AMCG00014306 |
| AMCG00014299 | mRNA | upstream | 228047 | 8204822 ~ 8250935 (+) | True | AMCG00014299 |
| AMCG00014293 | mRNA | upstream | 317702 | 8160408 ~ 8161280 (+) | True | AMCG00014293 |
| AMCG00014314 | mRNA | downstream | 287541 | 8795228 ~ 8824532 (+) | True | AMCG00014314 |
| AMCG00014315 | mRNA | downstream | 367480 | 8875167 ~ 8875832 (+) | True | AMCG00014315 |
| AMCG00014313 | mRNA | downstream | 436308 | 8943995 ~ 8972432 (+) | True | AMCG00014313 |
| AMCG00014316 | mRNA | downstream | 496813 | 9004500 ~ 9020633 (+) | True | AMCG00014316 |
| AMCG00014321 | mRNA | downstream | 582187 | 9089874 ~ 9130531 (+) | True | AMCG00014321 |
| TU86046 | other | upstream | 1062388 | 7413640 ~ 7416594 (+) | True | G68848 |
| TU86015 | other | upstream | 1129515 | 7346195 ~ 7349467 (+) | True | G68830 |
| TU85565 | other | upstream | 3827018 | 4649200 ~ 4651964 (+) | True | G68475 |
| TU85567 | other | upstream | 3827018 | 4649200 ~ 4651964 (+) | False | G68475 |
| TU84898 | other | upstream | 5768653 | 2709024 ~ 2710329 (+) | True | AMCG00014146 |
| TU86705 | other | downstream | 1495371 | 10003058 ~ 10008648 (+) | True | G69406 |
| TU87778 | other | downstream | 5829171 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU88057 | other | downstream | 7167944 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU88058 | other | downstream | 7167944 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU88218 | other | downstream | 7621838 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00062882 | True | 2430 | mRNA | 0.49 | 23 | NC_007117.7 | 37894914 ~ 38054851 (+) |
| grasscarp (Ctenopharyngodon idella) | CI01000340_08259928_08321896.mRNA | True | 2391 | mRNA | 0.48 | 21 | CI01000340 | 8259928 ~ 8321896 (+) |
