RNA id: AMCG00014310


Basic Information

Item Value
RNA id AMCG00014310
length 786
RNA type mRNA
GC content 0.45
exon number 4
gene id AMCG00014310
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 8601162 ~ 8615001 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTCTTTGTAATTACAGATGGATACCCTAGAGATGAAATGGTTTACAAGTGGAGGAAAAATTCAGTGGAAGCAGCAGACCAGAAATCCTGGCGACTTTACCAGTTTGATTTTATGGGTTTACGAAACACCACAgatgtaataaaaacatcttcagGTGATTACGTGGTAATGACAGTGTACTTTGATTTAAGTAGAAGAATGGGGTATTTTACCATCCAGACGTACATTCCTTGCATACTCACAGTTGTTTTATCGTGGGTCTCGTTCTGGATTAAGAAGGACGCCACCCCCGCCAGGACCGCACTTGGCATAACCACGGTATTGACCATGACAACGCTGAGTACAATCGCAAGAAATTCCTTACCAAGAGTCTCCTACGTCACAGCAATGGACCTCTTTGTGACCGTGTGCTTCTTGTTTGTCTTTGCGGCTTTGATGGAGTATGCAACGCTCAATTACTATTCCAGTGTAAGAAAGCCAAGCTGcacgaagaagaaaaaatcgAACTACTCGGTGCTCGATGTGGGACCACCTCCGACAGTCATCACATTAAACAATTCAATGTACTGGCAGGAGTTTGAGGAGGCCTGTGTGTACGAGTGCTTGGATGGCAAAGACTGTCAGAGTTTTTTCTGCTGCTATGAAGAATGTAAAGGCGGCGCGTGGCGGAAAGGACGGGTCCACATAGACATCTTAGAGCTAGACGCCTATTCTCGTGTCTTCTTTCCTACATCGTTTCTATTGTTCAACCTCGTCTACTGGGTTGGCTACCTCTACCTATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86331 lncRNA downstream 350601 8226494 ~ 8250561 (-) True G69086
TU86291 lncRNA downstream 464968 8134903 ~ 8136194 (-) True AMCG00014297
TU86202 lncRNA downstream 726804 7874153 ~ 7874358 (-) True G68981
TU86117 lncRNA downstream 974787 7625985 ~ 7626375 (-) True G68905
TU86087 lncRNA downstream 1135500 7465409 ~ 7465662 (-) True G68875
TU86493 lncRNA upstream 275555 8890556 ~ 8890839 (-) True G69233
TU86513 lncRNA upstream 383425 8998426 ~ 8998626 (-) True G69250
TU86641 lncRNA upstream 734787 9349788 ~ 9355238 (-) True G69352
TU86667 lncRNA upstream 974823 9589824 ~ 9590081 (-) True G69372
TU86668 lncRNA upstream 976175 9591176 ~ 9591381 (-) True G69373
AMCG00014312 mRNA downstream 62113 8536937 ~ 8539049 (-) True AMCG00014312
AMCG00014304 mRNA downstream 266710 8330056 ~ 8334452 (-) True AMCG00014304
AMCG00014305 mRNA downstream 274742 8322434 ~ 8326420 (-) True AMCG00014305
AMCG00014303 mRNA downstream 295981 8304531 ~ 8305181 (-) True AMCG00014303
AMCG00014302 mRNA downstream 340182 8259727 ~ 8260980 (-) True AMCG00014302
AMCG00014311 mRNA upstream 116577 8731578 ~ 8758181 (-) True AMCG00014311
AMCG00014317 mRNA upstream 415104 9030105 ~ 9040045 (-) True AMCG00014317
AMCG00014319 mRNA upstream 432303 9047304 ~ 9050642 (-) True AMCG00014319
AMCG00014320 mRNA upstream 446032 9061033 ~ 9085213 (-) True AMCG00014320
AMCG00014318 mRNA upstream 516414 9131415 ~ 9135387 (-) True AMCG00014318
TU86412 other downstream 216938 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 442572 8156229 ~ 8158590 (-) True AMCG00014298
TU86293 other downstream 462036 8137331 ~ 8139126 (-) False AMCG00014297
TU86071 other downstream 1177871 7417598 ~ 7423291 (-) False AMCG00014278
TU86038 other downstream 1220382 7378088 ~ 7380780 (-) True AMCG00014271
TU86630 other upstream 695450 9310451 ~ 9317167 (-) True AMCG00014328
TU86854 other upstream 2181715 10796716 ~ 10798147 (-) True G69537
TU87063 other upstream 3045020 11660021 ~ 11662493 (-) False AMCG00014374
TU90285 other upstream 19714738 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 20774289 29389290 ~ 29398305 (-) True G72477

Expression Profile