RNA id: AMCG00014324



Basic Information


Item Value
RNA id AMCG00014324
length 660
RNA type mRNA
GC content 0.55
exon number 4
gene id AMCG00014324
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 9259294 ~ 9273055 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AGATGTGCAGTTTAGCACAGACCTTGCACCATGGCTtcagtgctcctgctgtgggtTTTGCCATGTCTGGCGATGGTGTCTGGGCAGCCCAACTACTTCCCCGATGAACACTGGGTCAACAGGTACAGACAGGGCTTCAACTTCCAGTGCCCTCACGGTGAAGTCATCGCGGCTGTCAGGAGCTACTTCAACAAAGACGAGGGCTCGGACCGGCTCTGGACCTTTGACTGCCAGGCCACTCCAGTTGGCATGGGAGAGCCGACCGAGTGCTGGTGGGATGACATCCAACGAGCCGGAATGGAGTGGTATTCCACCTGCTCCAAAAATGGGTTGGTAGCTGGCGTCCAAAGCCAGTACTTCAGCGCAGTCCTGGATCGTGAGTGGCAGTTCTACTGCTGTAGATACAGTCGCAGGTGCCCTTATTCATGCTGGATGACCAATGAAGTCCCTACGTACTATCATGAAGAGGGAGATATGGTCGTTGAGAACTACGGCTATTTCATCAGGGGGGCAGGAACTACATTCAGCGGCGTTCTCAGGAAAGCTCACTGGGAAGATGTGGCCTACCTGCATGCACTGAAGTTGACCTTCCTGAGCAGGACTCCGGAGAAGCTTGCTGGGAATTGCTGGAGACAGCAGTGCTCAGGTCATCAGCTGTGA

Function


GO: NA

KEGG:

id description

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU86492 lncRNA upstream 368460 8890586 ~ 8890834 (+) True G69232
TU86463 lncRNA upstream 523355 8734323 ~ 8735939 (+) True G69206
TU86247 lncRNA upstream 1123084 8133288 ~ 8136210 (+) True G69023
TU86229 lncRNA upstream 1244291 8014744 ~ 8015003 (+) True G69006
TU86203 lncRNA upstream 1384552 7874527 ~ 7874742 (+) True G68982
TU86614 lncRNA downstream 93482 9366537 ~ 9376350 (+) True G69326
TU86679 lncRNA downstream 628395 9901450 ~ 9910048 (+) True G69384
TU86698 lncRNA downstream 701369 9974424 ~ 10028351 (+) True G69400
TU86728 lncRNA downstream 781436 10054491 ~ 10054711 (+) True G69428
TU86731 lncRNA downstream 782322 10055377 ~ 10055733 (+) True G69431
AMCG00014322 mRNA upstream 87232 9157744 ~ 9172062 (+) True AMCG00014322
AMCG00014323 mRNA upstream 114868 9137031 ~ 9144426 (+) True AMCG00014323
AMCG00014321 mRNA upstream 128763 9089874 ~ 9130531 (+) True AMCG00014321
AMCG00014316 mRNA upstream 238661 9004500 ~ 9020633 (+) True AMCG00014316
AMCG00014313 mRNA upstream 286862 8943995 ~ 8972432 (+) True AMCG00014313
AMCG00014327 mRNA downstream 55635 9328690 ~ 9361176 (+) True AMCG00014327
AMCG00014329 mRNA downstream 170144 9443199 ~ 9458087 (+) True AMCG00014329
AMCG00014330 mRNA downstream 202354 9475409 ~ 9482055 (+) True AMCG00014330
AMCG00014336 mRNA downstream 530902 9803957 ~ 9808880 (+) True AMCG00014336
AMCG00014337 mRNA downstream 567968 9841023 ~ 9908262 (+) True AMCG00014337
TU86046 other upstream 1842700 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 1909827 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 4607330 4649200 ~ 4651964 (+) True G68475
TU85567 other upstream 4607330 4649200 ~ 4651964 (+) False G68475
TU84898 other upstream 6548965 2709024 ~ 2710329 (+) True AMCG00014146
TU86705 other downstream 730003 10003058 ~ 10008648 (+) True G69406
TU87778 other downstream 5063803 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 6402576 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 6402576 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 6856470 16129525 ~ 16132802 (+) False AMCG00014508

Expression Profile