Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014352 |
| length | 1095 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 4 |
| gene id | AMCG00014352 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 10229000 ~ 10242261 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0018298 | protein-chromophore linkage | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0009881 | photoreceptor activity | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86759 | lncRNA | upstream | 4965 | 10223671 ~ 10224035 (+) | True | G69457 |
| TU86745 | lncRNA | upstream | 77087 | 10147979 ~ 10151913 (+) | True | AMCG00014345 |
| TU86731 | lncRNA | upstream | 173267 | 10055377 ~ 10055733 (+) | True | G69431 |
| TU86728 | lncRNA | upstream | 174289 | 10054491 ~ 10054711 (+) | True | G69428 |
| TU86698 | lncRNA | upstream | 200649 | 9974424 ~ 10028351 (+) | True | G69400 |
| TU86811 | lncRNA | downstream | 250886 | 10493147 ~ 10493396 (+) | True | G69499 |
| TU86857 | lncRNA | downstream | 594943 | 10837204 ~ 10838230 (+) | True | G69540 |
| TU86875 | lncRNA | downstream | 717065 | 10959326 ~ 10961929 (+) | True | G69556 |
| TU86944 | lncRNA | downstream | 978809 | 11221070 ~ 11221274 (+) | True | G69610 |
| TU87041 | lncRNA | downstream | 1398822 | 11641083 ~ 11641452 (+) | True | G69681 |
| AMCG00014344 | mRNA | upstream | 66835 | 10156465 ~ 10162165 (+) | True | AMCG00014344 |
| AMCG00014345 | mRNA | upstream | 77970 | 10148452 ~ 10151030 (+) | False | AMCG00014345 |
| AMCG00014342 | mRNA | upstream | 83298 | 10125154 ~ 10145702 (+) | True | AMCG00014342 |
| AMCG00014343 | mRNA | upstream | 157399 | 10015503 ~ 10071601 (+) | True | AMCG00014343 |
| AMCG00014338 | mRNA | upstream | 234329 | 9993673 ~ 9994671 (+) | True | AMCG00014338 |
| AMCG00014351 | mRNA | downstream | 66161 | 10308422 ~ 10318002 (+) | True | AMCG00014351 |
| AMCG00014350 | mRNA | downstream | 110584 | 10352845 ~ 10380421 (+) | True | AMCG00014350 |
| AMCG00014357 | mRNA | downstream | 423132 | 10665393 ~ 10671738 (+) | True | AMCG00014357 |
| AMCG00014356 | mRNA | downstream | 478823 | 10721084 ~ 10754147 (+) | True | AMCG00014356 |
| AMCG00014355 | mRNA | downstream | 524375 | 10766636 ~ 10801310 (+) | True | AMCG00014355 |
| TU86705 | other | upstream | 220352 | 10003058 ~ 10008648 (+) | True | G69406 |
| TU86046 | other | upstream | 2812406 | 7413640 ~ 7416594 (+) | True | G68848 |
| TU86015 | other | upstream | 2879533 | 7346195 ~ 7349467 (+) | True | G68830 |
| TU85565 | other | upstream | 5577036 | 4649200 ~ 4651964 (+) | True | G68475 |
| TU87778 | other | downstream | 4094597 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU88057 | other | downstream | 5433370 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU88058 | other | downstream | 5433370 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU88218 | other | downstream | 5887264 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88385 | other | downstream | 6223420 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00073864 | True | 1930 | mRNA | 0.48 | 4 | NC_007120.7 | 6118362 ~ 6208067 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000037_02527352_02576225.mRNA | True | 3298 | mRNA | 0.46 | 7 | CI01000037 | 2526102 ~ 2576704 (+) |
