RNA id: AMCG00014354


Basic Information

Item Value
RNA id AMCG00014354
length 402
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00014354
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10525613 ~ 10526969 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCCTACAAACCCTGGCTGTGTTCCCAGTACTTTGAGACCACGCAGATCCACTGCAGTAACAGAATCCCTTGCAAGCACTACTGTTTGGAAGTCCAGACGAGGTGTCCATTTATATTGCCAGACAATGATGATCTTATCTATGGAGGAATGCCAAGTTTTATATGTACagATAACCAATCCAAAGGGACAATAAAAAGAACTGACCCCATGTCGTGTCATCATAGGACATCACTTGCAACCTCTGCAGCTTCGAGACTGTGTAACAGCAGGCTTAAACTCTGCATCCTAGTCCTAATTCTTTTACATACCGTTGTAAGTTTGACTGCAGCACAGAACTCCACAGGCTTTGGTTTTGGGGGAATTGCTACACTAGAGGAGAACCCAAACAACGAGGAATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86807 lncRNA downstream 46604 10420180 ~ 10479009 (-) True G69495
TU86793 lncRNA downstream 184667 10337887 ~ 10340946 (-) True G69483
TU86735 lncRNA downstream 464521 10058097 ~ 10061092 (-) False AMCG00014339
TU86736 lncRNA downstream 464521 10058097 ~ 10061092 (-) True AMCG00014339
TU86727 lncRNA downstream 471338 10053737 ~ 10054275 (-) True G69427
TU86840 lncRNA upstream 154101 10681070 ~ 10681292 (-) True G69523
TU86845 lncRNA upstream 212447 10739416 ~ 10739930 (-) True G69528
TU86847 lncRNA upstream 239631 10766600 ~ 10768258 (-) True G69530
TU86848 lncRNA upstream 246214 10773183 ~ 10773422 (-) True G69531
TU86849 lncRNA upstream 250082 10777051 ~ 10777441 (-) True G69532
AMCG00014347 mRNA downstream 197382 10318244 ~ 10328231 (-) True AMCG00014347
AMCG00014349 mRNA downstream 224252 10300003 ~ 10301361 (-) True AMCG00014349
AMCG00014348 mRNA downstream 269238 10241006 ~ 10256375 (-) True AMCG00014348
AMCG00014346 mRNA downstream 327862 10192629 ~ 10197751 (-) True AMCG00014346
AMCG00014339 mRNA downstream 464383 10058268 ~ 10061230 (-) False AMCG00014339
AMCG00014353 mRNA upstream 125310 10652279 ~ 10708018 (-) True AMCG00014353
AMCG00014358 mRNA upstream 373039 10900008 ~ 10903196 (-) True AMCG00014358
AMCG00014359 mRNA upstream 434280 10961249 ~ 10974117 (-) True AMCG00014359
AMCG00014360 mRNA upstream 447496 10974465 ~ 10991144 (-) True AMCG00014360
AMCG00014364 mRNA upstream 561778 11088747 ~ 11096433 (-) True AMCG00014364
TU86630 other downstream 1208446 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 2141389 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 2367023 8156229 ~ 8158590 (-) True AMCG00014298
TU86293 other downstream 2386487 8137331 ~ 8139126 (-) False AMCG00014297
TU86071 other downstream 3102322 7417598 ~ 7423291 (-) False AMCG00014278
TU86854 other upstream 269747 10796716 ~ 10798147 (-) True G69537
TU87063 other upstream 1133052 11660021 ~ 11662493 (-) False AMCG00014374
TU90285 other upstream 17802770 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 18862321 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 21736198 32263167 ~ 32263427 (-) True G73047

Expression Profile