RNA id: AMCG00014360


Basic Information

Item Value
RNA id AMCG00014360
length 1029
RNA type mRNA
GC content 0.59
exon number 12
gene id AMCG00014360
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10974465 ~ 10991144 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGAACCAGGAACTCCAGGACTTAAAGGAATGCGTGGTTCATCAGGTTTACCAGGATTTCCAGGAAACCCAGGCCTTCCAGGTATCCCAGGACAAGACGGTCCTCCTGGTTCACCAGGAATCCCAGGGTGCAATGGGACAAAGggTGAACGAGGCTTTGATGGAATCCCTGGCATTCCAGGACTTCTGGGACCCCCTGGAGAACGTGGCCCCCCGGGCCCTCCAGGACCAAAGGGTAATACCGGCCTACCCGGTCTCAGTCTCCAGGGACCCCCAGGTAATCCAGGGTATCCAGGAGAGTCTGGTCAGAAGGGTGATCAAGGGGCTCCTGGGCTGTCACTGCCCGGTGAGAGAGGTCAGGACGGGCTCCCCGGCTTTCCAGGTCCCCCGGGGCCTCCAGGTGTTGGGCCATGTAATATTTCACAAGGCCCCCCAGGTCCTCCCGGCTCACCAGGATTTCAAGGAGAGTCAGGACAGAAAGGGGACAAAGGAGATACCTGTATCCACTGTGAAGCCTTTGGGCCACCCGGACTTCCTGGACCCATGGGTCCTACAGGACAGCAAGGGTATCAACGGAGCACCAGGCCTGATAGGAAATCCAGGTGCACACGGGGAACCAGGGGATGTCTTCTTTGCACCTGGCCTGAAAGGGGACAAGGGCAGCCCAGGCATCAAGGGTACTCCTGGAATTCCAGGATTAGATGGATTTCCAGGGCATAATGGCACTCGTGGACCCCCTGGCCCCAGAGGACTACCAGCAAATGAGGGTAACAAAGGAGACCAAGGAAGGGATGGGGACCCAGGTCTGCCAGGGCCCCATGGGGACAGGGGACCTCCTGGAATCCCAGGGTACGGCCGTCCAGGTGAACCCGGAGAGAAGGGAAACCAGGGAGTCCCAGGAAACCCAGGAGCTCCTGGTTTTGCAGGAGCTAAGGGTGAACGTGGCCAAATACTGAGTGTCCCTGGGCCGGCAGGCAGTCCTGGACCACAGGGACCCACTGGGAGACCAGGAATTCAAGGCAAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86856 lncRNA downstream 153393 10815771 ~ 10821072 (-) True G69539
TU86853 lncRNA downstream 178276 10795883 ~ 10796189 (-) True G69536
TU86852 lncRNA downstream 181319 10792919 ~ 10793146 (-) True G69535
TU86849 lncRNA downstream 197024 10777051 ~ 10777441 (-) True G69532
TU86848 lncRNA downstream 201043 10773183 ~ 10773422 (-) True G69531
TU86933 lncRNA upstream 141644 11132788 ~ 11137086 (-) False AMCG00014365
TU87123 lncRNA upstream 778546 11769690 ~ 11771393 (-) True G69743
TU87141 lncRNA upstream 887953 11879097 ~ 11880456 (-) True G69759
TU87239 lncRNA upstream 1979109 12970253 ~ 12970555 (-) True G69849
TU87308 lncRNA upstream 2094219 13085363 ~ 13086345 (-) True G69896
AMCG00014359 mRNA downstream 348 10961249 ~ 10974117 (-) True AMCG00014359
AMCG00014358 mRNA downstream 71269 10900008 ~ 10903196 (-) True AMCG00014358
AMCG00014353 mRNA downstream 266447 10652279 ~ 10708018 (-) True AMCG00014353
AMCG00014354 mRNA downstream 447496 10525613 ~ 10526969 (-) True AMCG00014354
AMCG00014347 mRNA downstream 646234 10318244 ~ 10328231 (-) True AMCG00014347
AMCG00014364 mRNA upstream 97603 11088747 ~ 11096433 (-) True AMCG00014364
AMCG00014368 mRNA upstream 113834 11104978 ~ 11121831 (-) True AMCG00014368
AMCG00014365 mRNA upstream 133885 11125029 ~ 11137076 (-) True AMCG00014365
AMCG00014366 mRNA upstream 148308 11139452 ~ 11144825 (-) True AMCG00014366
AMCG00014367 mRNA upstream 176496 11167640 ~ 11175442 (-) True AMCG00014367
TU86854 other downstream 176318 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 1657298 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 2590241 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 2815875 8156229 ~ 8158590 (-) True AMCG00014298
TU86293 other downstream 2835339 8137331 ~ 8139126 (-) False AMCG00014297
TU87063 other upstream 668877 11660021 ~ 11662493 (-) False AMCG00014374
TU90285 other upstream 17338595 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 18398146 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 21272023 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 21606318 32597462 ~ 32614806 (-) True G73127

Expression Profile