RNA id: AMCG00014366


Basic Information

Item Value
RNA id AMCG00014366
length 822
RNA type mRNA
GC content 0.53
exon number 3
gene id AMCG00014366
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11139452 ~ 11144825 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTAAGAAATGCTAGTGGCCTGACAGCAGCAGATCTTGCACATGCCCAGGGATTCCAGGAGTGTGCAGAACTCCTTTCAAACGTGCAGAACCAGCTCAATCAGCTCAATGGCTTCTGTACCAATGGGGCTTTAAATGGCGTCCAGCAGGCCACCAACACAAGAAGCCACTTCAATGGCGCACCCAATAGAAAGAGATCCCTTGAATATCTGGAGTCTAACCTGGTCAAGAAAGCCAGAACTGATGGCCTGGACATGCCTATGAAGCTGTACAGAAGTGCTGAGGACGAGCTGGAAACCATGCACACTGAGACGGCACCGCAAGTCAGTTCAGGTGCGTCTGTATCCGCAGATTTGAGGAACGGTTGCATGCCAGGAAAGGCTTTGCTGGGCAACGGATTTGCTGTAAATGGGCTTTACCAGCCAGCGCAGCTCAATGGAGTGGAGGCCAAGTCAGTGAATGGCTTCTCTGCCGAATGGGTCCTAGCAGGGTCCCACACCAGTGGAAACGGATTGGCAGTCAGGACCTCAGACCCTGGCACTCTCACTGAAAATGGCTCGAAATCCTCCGATATGTGCGGCTCTCTGCACCTCAGTGGAAGCCCTAGTAGTTGTGTAACACACAGGCCTTCTTGGGCTACAGGTAGCCCCTCGGAGCTGGGCGATCCCGGTGAAAATCTACAGTACGGGCATTACCATGGGTTTGGAGACACGGCTGAGAACATACCTGAGGCTAGCAGCCAAGTGGAGCACACTCGATCAATGAAAGTAGAGCAGCGCTACGATAATGCTGTTTTCAGCACCTTGCACCTCTACCACGGCTCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86933 lncRNA downstream 2366 11132788 ~ 11137086 (-) False AMCG00014365
TU86856 lncRNA downstream 318380 10815771 ~ 10821072 (-) True G69539
TU86853 lncRNA downstream 343263 10795883 ~ 10796189 (-) True G69536
TU86852 lncRNA downstream 346306 10792919 ~ 10793146 (-) True G69535
TU86849 lncRNA downstream 362011 10777051 ~ 10777441 (-) True G69532
TU87123 lncRNA upstream 624865 11769690 ~ 11771393 (-) True G69743
TU87141 lncRNA upstream 734272 11879097 ~ 11880456 (-) True G69759
TU87239 lncRNA upstream 1825428 12970253 ~ 12970555 (-) True G69849
TU87308 lncRNA upstream 1940538 13085363 ~ 13086345 (-) True G69896
TU87309 lncRNA upstream 1940538 13085363 ~ 13086345 (-) False G69896
AMCG00014365 mRNA downstream 2376 11125029 ~ 11137076 (-) True AMCG00014365
AMCG00014368 mRNA downstream 17621 11104978 ~ 11121831 (-) True AMCG00014368
AMCG00014364 mRNA downstream 43019 11088747 ~ 11096433 (-) True AMCG00014364
AMCG00014360 mRNA downstream 148308 10974465 ~ 10991144 (-) True AMCG00014360
AMCG00014359 mRNA downstream 165335 10961249 ~ 10974117 (-) True AMCG00014359
AMCG00014367 mRNA upstream 22815 11167640 ~ 11175442 (-) True AMCG00014367
AMCG00014372 mRNA upstream 314788 11459613 ~ 11502601 (-) True AMCG00014372
AMCG00014374 mRNA upstream 515186 11660011 ~ 11667537 (-) True AMCG00014374
AMCG00014380 mRNA upstream 552364 11697189 ~ 11722453 (-) True AMCG00014380
AMCG00014379 mRNA upstream 605366 11750191 ~ 11755461 (-) True AMCG00014379
TU86854 other downstream 341305 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 1822285 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 2755228 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 2980862 8156229 ~ 8158590 (-) True AMCG00014298
TU86293 other downstream 3000326 8137331 ~ 8139126 (-) False AMCG00014297
TU87063 other upstream 515196 11660021 ~ 11662493 (-) False AMCG00014374
TU90285 other upstream 17184914 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 18244465 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 21118342 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 21452637 32597462 ~ 32614806 (-) True G73127

Expression Profile