Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014383 |
| length | 1141 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 11 |
| gene id | AMCG00014383 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 11870025 ~ 11877714 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K10744 | RNASEH2B; ribonuclease H2 subunit B |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87118 | lncRNA | upstream | 85942 | 11783865 ~ 11784083 (+) | True | G69739 |
| TU87100 | lncRNA | upstream | 147258 | 11719318 ~ 11722767 (+) | True | G69722 |
| TU87041 | lncRNA | upstream | 228573 | 11641083 ~ 11641452 (+) | True | G69681 |
| TU86944 | lncRNA | upstream | 648751 | 11221070 ~ 11221274 (+) | True | G69610 |
| TU86875 | lncRNA | upstream | 908096 | 10959326 ~ 10961929 (+) | True | G69556 |
| TU87160 | lncRNA | downstream | 722390 | 12600104 ~ 12600313 (+) | True | G69778 |
| TU87223 | lncRNA | downstream | 1102545 | 12980259 ~ 12982434 (+) | True | G69833 |
| TU87357 | lncRNA | downstream | 1368595 | 13246309 ~ 13251732 (+) | True | AMCG00014407 |
| TU87358 | lncRNA | downstream | 1368595 | 13246309 ~ 13251732 (+) | False | AMCG00014407 |
| TU87406 | lncRNA | downstream | 1456500 | 13334214 ~ 13335185 (+) | True | G69959 |
| AMCG00014375 | mRNA | upstream | 102435 | 11766428 ~ 11767590 (+) | True | AMCG00014375 |
| AMCG00014382 | mRNA | upstream | 108124 | 11759901 ~ 11761901 (+) | True | AMCG00014382 |
| AMCG00014381 | mRNA | upstream | 158094 | 11711398 ~ 11711931 (+) | True | AMCG00014381 |
| AMCG00014377 | mRNA | upstream | 173099 | 11689233 ~ 11696926 (+) | True | AMCG00014377 |
| AMCG00014378 | mRNA | upstream | 191844 | 11668156 ~ 11678181 (+) | True | AMCG00014378 |
| AMCG00014387 | mRNA | downstream | 22808 | 11900522 ~ 11901421 (+) | True | AMCG00014387 |
| AMCG00014388 | mRNA | downstream | 65861 | 11943575 ~ 11944826 (+) | True | AMCG00014388 |
| AMCG00014394 | mRNA | downstream | 945839 | 12823553 ~ 12834319 (+) | True | AMCG00014394 |
| AMCG00014393 | mRNA | downstream | 957236 | 12834950 ~ 12841128 (+) | True | AMCG00014393 |
| AMCG00014392 | mRNA | downstream | 965076 | 12842790 ~ 12849371 (+) | True | AMCG00014392 |
| TU86705 | other | upstream | 1861377 | 10003058 ~ 10008648 (+) | True | G69406 |
| TU86046 | other | upstream | 4453431 | 7413640 ~ 7416594 (+) | True | G68848 |
| TU86015 | other | upstream | 4520558 | 7346195 ~ 7349467 (+) | True | G68830 |
| TU85565 | other | upstream | 7218061 | 4649200 ~ 4651964 (+) | True | G68475 |
| TU87778 | other | downstream | 2459144 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU88057 | other | downstream | 3797917 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU88058 | other | downstream | 3797917 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU88218 | other | downstream | 4251811 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88385 | other | downstream | 4587967 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
