RNA id: AMCG00014387



Basic Information


Item Value
RNA id AMCG00014387
length 900
RNA type mRNA
GC content 0.51
exon number 1
gene id AMCG00014387
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11900522 ~ 11901421 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTGTGTGAGAGTTTTCTTTGGACCATCCCCTATGGCAGTGACTGTGAGACACAGGTTCCTAGCAGTGCAAAGGAGGAGAAAGACTGTGGTCGTTCTGATATTACTTCAGTCATCAACCATGCATTACAAAGCACAGCGGACGAGGTTCTGAACGAGCCCCCACTGGAGACATGGAAGAGCACGGGGCAGTTCGAGAACAAGAGTCCGTTTTGGAACAAGAGGCCGCTCAGGAAAAGTGGGTCTAGAAAGGCTGCCCAGTACAACAGGCAGATCTCACCTGTGGTTGACATCCCAGGACAGTCGAGGTCCAACAAAGAGACATACCTGGTTCCTTCATCATGTAAGAGCATCTGCAAAGACTACAATGACCTGCACATCGCAGGGGACCAGGTGATGCCCATCAGTTCCAGCACTGTTGATTTGACCATTGACAGCGCTGTGGAGTTGGCAGAGGGTCCCTTTCTTCACTCTTCTGAGATTCCTCCTGCTATGGAGAGTCCCAGACCGTCCCCGGAGTTTGCCCAAAAGCGCAAAGTCGACTCCTCCTGCTGGAGAGTGGGGAGCGCGAAGGACAAGAGCTTCCTACAGCACTGCCGTCCACTGTCCAACTCCATGCTCAACGAATACCTGGAGCAGAAGATCATGGACCTGTATAAGCAGTACATGGTGGAGAGTATGCTCAACAGCAATTCTCCCACCACCATCTTGGCATCAGAACTCATCCTCAACAATGTAGACCAGATAACCCAGCAGCTCTCCCGGGAGCAGAACATGGAGACCACCAAGGCCAAGGACATGGTAATCAGCTGTCTGTTGAGGGTGGCCAGTGGTCTACAGTCTAGTGAGCTCAGCACCCCTCAGTTACAGATCTCTAGTAATGTTAGAATTAACTGTTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87118 lncRNA upstream 116439 11783865 ~ 11784083 (+) True G69739
TU87100 lncRNA upstream 177755 11719318 ~ 11722767 (+) True G69722
TU87041 lncRNA upstream 259070 11641083 ~ 11641452 (+) True G69681
TU86944 lncRNA upstream 679248 11221070 ~ 11221274 (+) True G69610
TU86875 lncRNA upstream 938593 10959326 ~ 10961929 (+) True G69556
TU87160 lncRNA downstream 698683 12600104 ~ 12600313 (+) True G69778
TU87223 lncRNA downstream 1078838 12980259 ~ 12982434 (+) True G69833
TU87357 lncRNA downstream 1344888 13246309 ~ 13251732 (+) True AMCG00014407
TU87358 lncRNA downstream 1344888 13246309 ~ 13251732 (+) False AMCG00014407
TU87406 lncRNA downstream 1432793 13334214 ~ 13335185 (+) True G69959
AMCG00014383 mRNA upstream 22808 11870025 ~ 11877714 (+) True AMCG00014383
AMCG00014375 mRNA upstream 132932 11766428 ~ 11767590 (+) True AMCG00014375
AMCG00014382 mRNA upstream 138621 11759901 ~ 11761901 (+) True AMCG00014382
AMCG00014381 mRNA upstream 188591 11711398 ~ 11711931 (+) True AMCG00014381
AMCG00014377 mRNA upstream 203596 11689233 ~ 11696926 (+) True AMCG00014377
AMCG00014388 mRNA downstream 42154 11943575 ~ 11944826 (+) True AMCG00014388
AMCG00014394 mRNA downstream 922132 12823553 ~ 12834319 (+) True AMCG00014394
AMCG00014393 mRNA downstream 933529 12834950 ~ 12841128 (+) True AMCG00014393
AMCG00014392 mRNA downstream 941369 12842790 ~ 12849371 (+) True AMCG00014392
AMCG00014402 mRNA downstream 1068837 12970258 ~ 12978095 (+) True AMCG00014402
TU86705 other upstream 1891874 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 4483928 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 4551055 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 7248558 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 2435437 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 3774210 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 3774210 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 4228104 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 4564260 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile