Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014388 |
| length | 783 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 2 |
| gene id | AMCG00014388 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 11943575 ~ 11944826 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030104 | water homeostasis | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0043401 | steroid hormone mediated signaling pathway | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0003707 | steroid hormone receptor activity | molecular_function |
| id | description |
|---|---|
| K08562 | NR0B1, DAX1; nuclear receptor subfamily 0 group B member 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87118 | lncRNA | upstream | 159492 | 11783865 ~ 11784083 (+) | True | G69739 |
| TU87100 | lncRNA | upstream | 220808 | 11719318 ~ 11722767 (+) | True | G69722 |
| TU87041 | lncRNA | upstream | 302123 | 11641083 ~ 11641452 (+) | True | G69681 |
| TU86944 | lncRNA | upstream | 722301 | 11221070 ~ 11221274 (+) | True | G69610 |
| TU86875 | lncRNA | upstream | 981646 | 10959326 ~ 10961929 (+) | True | G69556 |
| TU87160 | lncRNA | downstream | 655278 | 12600104 ~ 12600313 (+) | True | G69778 |
| TU87223 | lncRNA | downstream | 1035433 | 12980259 ~ 12982434 (+) | True | G69833 |
| TU87357 | lncRNA | downstream | 1301483 | 13246309 ~ 13251732 (+) | True | AMCG00014407 |
| TU87358 | lncRNA | downstream | 1301483 | 13246309 ~ 13251732 (+) | False | AMCG00014407 |
| TU87406 | lncRNA | downstream | 1389388 | 13334214 ~ 13335185 (+) | True | G69959 |
| AMCG00014387 | mRNA | upstream | 42154 | 11900522 ~ 11901421 (+) | True | AMCG00014387 |
| AMCG00014383 | mRNA | upstream | 65861 | 11870025 ~ 11877714 (+) | True | AMCG00014383 |
| AMCG00014375 | mRNA | upstream | 175985 | 11766428 ~ 11767590 (+) | True | AMCG00014375 |
| AMCG00014382 | mRNA | upstream | 181674 | 11759901 ~ 11761901 (+) | True | AMCG00014382 |
| AMCG00014381 | mRNA | upstream | 231644 | 11711398 ~ 11711931 (+) | True | AMCG00014381 |
| AMCG00014394 | mRNA | downstream | 878727 | 12823553 ~ 12834319 (+) | True | AMCG00014394 |
| AMCG00014393 | mRNA | downstream | 890124 | 12834950 ~ 12841128 (+) | True | AMCG00014393 |
| AMCG00014392 | mRNA | downstream | 897964 | 12842790 ~ 12849371 (+) | True | AMCG00014392 |
| AMCG00014402 | mRNA | downstream | 1025432 | 12970258 ~ 12978095 (+) | True | AMCG00014402 |
| AMCG00014404 | mRNA | downstream | 1033339 | 12978165 ~ 12978428 (+) | True | AMCG00014404 |
| TU86705 | other | upstream | 1934927 | 10003058 ~ 10008648 (+) | True | G69406 |
| TU86046 | other | upstream | 4526981 | 7413640 ~ 7416594 (+) | True | G68848 |
| TU86015 | other | upstream | 4594108 | 7346195 ~ 7349467 (+) | True | G68830 |
| TU85565 | other | upstream | 7291611 | 4649200 ~ 4651964 (+) | True | G68475 |
| TU87778 | other | downstream | 2392032 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU88057 | other | downstream | 3730805 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU88058 | other | downstream | 3730805 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU88218 | other | downstream | 4184699 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88385 | other | downstream | 4520855 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
