RNA id: AMCG00014400


Basic Information

Item Value
RNA id AMCG00014400
length 3301
RNA type mRNA
GC content 0.41
exon number 13
gene id AMCG00014400
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13029886 ~ 13040944 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTTTTCTGCAACAGCAGCACAGCCCAATCTCCCAGTGGGAATGTCAGTTTTGATAGAATTCTGATTGGCTTGTCTGGCTACTCCAAGGAGACGTGTCTTAATGGACCCAATGCTGGTATTCCTAAGGCATCTCGCAGGTGTACAAATGACACTGGAGGTTTGCAGTTAAGTGCGCCCAGATTTGTGAGTTGTGATGCGAACCTGAACAACCTTGCAGATCAGattaacaacaacacaaatgttgAAGAATTACTGCAGATCGCCAGCAACACTCAGATTTTGACCTCACAGCCTGAGAGATTAACTGCTAAGAACATCTCCAGTGCAGCGGAGATTGCCCGACGGTTTCTGGAATTCCGCACTGCGAACTTCCATGAGGAGATAGCAGTTGCTGCGGTCACCACTATTAGCCAACTACTGAATGCAAGTGATGCAGAGTATTCTTCAGACAACAGTGAAGTGGTTAACAGCTTAACAGAGACTTTGGAGAATTTCACTCTTTACCAAAATAACATCTCACAAGTGGTGCAGCCAAACCTGGCTTTGGAGTCTGTGAACATAATCAAGGGCTCCACACAGGGGGTACAGTTCACTGCACTGGCAAGTGTAAAAACGGATGGGCAGATTGGCTTTGTACTTTACCAAAATGATAAATTCTTTAGGTCCAGAGCACACAGAGGCAATCTAGTCTCAACCAGGAGAGTGATCTCTGGAAACATCAGGGGAGGAATGCTTAATGTGGTTGAACTTCTCTTTGGCCAGCAAGTTGTTCCCAATTTCAACCTGCATGACTATTCCTGTGTGTTCTGGAACTACAGTACTACAGACTGGAGCACAAATGGCTGCTCCAAAGGAAAAGATCCATTTGGGTATCTGAAATGCCAGTGCAATCACACCACTAATTTTGCTGTGCTAATGaCCTTCAGACAGAATTACACCTATTCAAAGCCACTGGAAGTGATATCATATGTGGGATGTGGACTATCCATGGCGGGACTGTCTCTAACTATTTTGTACCAGATTGTAACTAGGAAGACACGTAAAACAACCCCCACGGTACTCTTGGTGAGCGTCTGCATGTCTATGCTGATGTTTAATATAGTCTTCATTGCTGGAATCTCTAACACAAATCAAGAGACTCAGATCAGGACGAACAGCACTGAGAACGTCTTGCCAAACTCAGACATTTACATTGAGCCGGACAAGGGGCCATGCACAGCTGTAGCAGCCCTGCTACACTTCTTCTTGCTGGCCAGCTTCACCTGGGCACTGCTCTATGCTGTCCAGGTGTACATGATCCTAGTCAACGTCTTCAGCCAGCCTCCCCAGCACTTCGGCTTGATCACAATAGCAGTCGGCTGGGTGGTGGTGGCTATAACATTAGCAGTTCTGTATCGTGTGGAGAACCCATTAGATTATCGCCAGGAGGAGTTctgCTGGCTGGCTGCACTGGATAGAGAGGGGAAGTTTGACTTCAAAAAGCCGATGTTGTGGGCATTTCTTCTTCCTGTGGCCTTAATCCTAATATTCAACATGGTGCTGCTGGTGCGTGTAACACTGGAATTGTGCAGGAGTAACCCTAATTTAAACAGCACTAAGAAGAATTCTTACCTGAAGAAATTCCTCAGCAGCCTTTCTGTTGCCGTTGTGCTGGGAGTATCCTGGGTACTGGGCTATCTCTTACTGATAGACCATGACCAGTCCTCGGTTGTCTTCAGCtatatattctgcattttaaactcCACCCAGGGgcttcagatatttattttgttcactgtTCGAACATCATTGTTCAAGAAGAAGGTATCAGAGATTATAAACTCCACCAGTGGTCCCGAAATATACCTACACTCAAAGACTTTCAAGCTGATGAGTTTCAAACGTCATATCCACAAGGAAACATACCGACCAACAGAAGAATTTTTAACTAGCAGATCCTCATTCTCCAGTTCTTAAAAAGTGTGTCAGTTGCTCTGTAACCCTCAGGGCTCAACTCTGTTGTGTCTCTAGGACTCTCATACAGCTGCTGTTATTTATTCACCACATTATCCTAAATACACCAGTTACTTGTTGTCTCTTTAATACCCACTATCAGCATTTCATTACATCTGAAACAAGTCCTCTTTAATATGgcttcacttttgttttttagcttCCCcctcaaaacaaaaccttataTTCTGGTTACCTCTTCTGCACAAACAAAGATAGGATTCCTTCCCCCAAAACTAGTCACTTTTTCATACTAACTAATACACTAATTCAATTAACTAATAATTAGCTCCAAACCATaatcaaacatttttctttgtggAAAAACACCTCCTCGAGGGCActtgtgtgtggtgggggggcaccCTTTGGGGCAGGAGGGCAAGGGCTTAAACCCCCCTAGTGCACATCACTGATTGTAAGGGTATTTTGATGCTGTTACACCTATATCTGTTGCAactgtatttatcaattaaactGTTTGCTGTAAGTCACAAATGAACATAGGAAAGTGATTTGTCATTTCTTTCTGAAACTTGACCTGAGTTGTTGTGGCAATATGTTTGACCACTATAGTAAAGCCAAACCGTGCTGACTTAATTGTGACatacattgaaattatttaCCAAATCAcaccaatacaatgcattttttgttttgtatttctaacaCCTATCTATGAAACTACTAAGAAGCTAATGACACAATACATCTAATTCAATATATTCTTGTAATTTAGCAGTTGATTCCCCTGAGTGGTTCAGCACTcctgtaattttgcattttatattactgTTTCTTTACACTGCTTGCtcttacattgctagtactgctgttgtttatttgtgatttcccCTATTCCCCTTCCCTTTACCTCTTACCTGACTTCagcacatcttgtctgcacttgttagctattAGAACTAGGATGTACaacttgtgttttatattaccTGAATATTTTACCAATACACTGCTGtaactttcaaaatgtaattgtactATGCTTGATTTATagttttttactgtattttcatttcacgTTTGCATTGCTCTTGTgtcctgtaagtcaccctggataaggttgtctgtcaagaaataaacaaacaaacacacaaacaaataaatacatacacatattcaatagatattgaataataataataataataataatgaaaatgtacttgttttatGACTATTGCATTACTATATTTTACTAAGTTAGTACTTTAGTAAGTATTCTACTCATccgtgtgtgtattttattatttcctgtaAGAAGTATTATTAAACAGCATATCAAAAA

Function

GO: NA

KEGG:

id description
K08464 ADGRG7, GPR128; adhesion G-protein coupled receptor G7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU87223 lncRNA upstream 47452 12980259 ~ 12982434 (+) True G69833
TU87160 lncRNA upstream 429573 12600104 ~ 12600313 (+) True G69778
TU87118 lncRNA upstream 1245803 11783865 ~ 11784083 (+) True G69739
TU87100 lncRNA upstream 1307119 11719318 ~ 11722767 (+) True G69722
TU87041 lncRNA upstream 1388434 11641083 ~ 11641452 (+) True G69681
TU87357 lncRNA downstream 205365 13246309 ~ 13251732 (+) True AMCG00014407
TU87358 lncRNA downstream 205365 13246309 ~ 13251732 (+) False AMCG00014407
TU87406 lncRNA downstream 293270 13334214 ~ 13335185 (+) True G69959
TU87408 lncRNA downstream 311389 13352333 ~ 13379593 (+) False G69961
TU87409 lncRNA downstream 336590 13377534 ~ 13380404 (+) True G69961
AMCG00014399 mRNA upstream 14232 13009705 ~ 13015654 (+) True AMCG00014399
AMCG00014403 mRNA upstream 50777 12978471 ~ 12979109 (+) True AMCG00014403
AMCG00014404 mRNA upstream 51458 12978165 ~ 12978428 (+) True AMCG00014404
AMCG00014402 mRNA upstream 51791 12970258 ~ 12978095 (+) True AMCG00014402
AMCG00014392 mRNA upstream 180515 12842790 ~ 12849371 (+) True AMCG00014392
AMCG00014401 mRNA downstream 16921 13057865 ~ 13065977 (+) True AMCG00014401
AMCG00014406 mRNA downstream 198129 13239073 ~ 13240110 (+) True AMCG00014406
AMCG00014405 mRNA downstream 199896 13240840 ~ 13245634 (+) True AMCG00014405
AMCG00014407 mRNA downstream 205406 13246350 ~ 13250280 (+) False AMCG00014407
AMCG00014414 mRNA downstream 225073 13266017 ~ 13274303 (+) True AMCG00014414
TU86705 other upstream 3021238 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 5613292 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 5680419 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 8377922 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 1295914 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 2634687 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 2634687 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 3088581 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 3424737 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile