RNA id: AMCG00014403



Basic Information


Item Value
RNA id AMCG00014403
length 453
RNA type mRNA
GC content 0.61
exon number 3
gene id AMCG00014403
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 12978471 ~ 12979109 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGTGGCCATCCTGGGATACCTGGCCCAGAAGGAGCAAATGGCCCACCCGGTTTACCTGGTCCTATTGGGCCACCAGGAGGACTTGGCTTTCCAGgacaacctggCTTTCCTGGAGAAGCAGGCCAGCCAGGACCAAGAGGTTTACCAGGTCCTTTGGGCCCCAAAGGGGAAAATGGACACAAAGGCCTACCAGGACTTCCCGGGACCCCTGGAGTACCTGGGCCAAAAGGAGAAGGTGGACAGCCAGGAGAGCAAGGCCAACAAGGCCCCAAGGGAAAACAAGGGCTCGCGGGACCTGCGGGGGCCCCAGGGAAGCCAGGAGCTTTTGGACCTCCAGGTCAACCTGGACAGCCTGGACAACCAGGCCCTCCTGGCCCACCTGGTCCACCAGCCCAAACTCCAGGCCTCGGCCAGATCATGCCTGAAATGGGTCCAGGTTTGGACGGCATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87160 lncRNA upstream 378158 12600104 ~ 12600313 (+) True G69778
TU87118 lncRNA upstream 1194388 11783865 ~ 11784083 (+) True G69739
TU87100 lncRNA upstream 1255704 11719318 ~ 11722767 (+) True G69722
TU87041 lncRNA upstream 1337019 11641083 ~ 11641452 (+) True G69681
TU86944 lncRNA upstream 1757197 11221070 ~ 11221274 (+) True G69610
TU87223 lncRNA downstream 1150 12980259 ~ 12982434 (+) True G69833
TU87357 lncRNA downstream 267200 13246309 ~ 13251732 (+) True AMCG00014407
TU87358 lncRNA downstream 267200 13246309 ~ 13251732 (+) False AMCG00014407
TU87406 lncRNA downstream 355105 13334214 ~ 13335185 (+) True G69959
TU87408 lncRNA downstream 373224 13352333 ~ 13379593 (+) False G69961
AMCG00014404 mRNA upstream 43 12978165 ~ 12978428 (+) True AMCG00014404
AMCG00014402 mRNA upstream 376 12970258 ~ 12978095 (+) True AMCG00014402
AMCG00014392 mRNA upstream 129100 12842790 ~ 12849371 (+) True AMCG00014392
AMCG00014393 mRNA upstream 137343 12834950 ~ 12841128 (+) True AMCG00014393
AMCG00014394 mRNA upstream 144152 12823553 ~ 12834319 (+) True AMCG00014394
AMCG00014399 mRNA downstream 30596 13009705 ~ 13015654 (+) True AMCG00014399
AMCG00014400 mRNA downstream 50777 13029886 ~ 13040944 (+) True AMCG00014400
AMCG00014401 mRNA downstream 78756 13057865 ~ 13065977 (+) True AMCG00014401
AMCG00014406 mRNA downstream 259964 13239073 ~ 13240110 (+) True AMCG00014406
AMCG00014405 mRNA downstream 261731 13240840 ~ 13245634 (+) True AMCG00014405
TU86705 other upstream 2969823 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 5561877 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 5629004 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 8326507 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 1357749 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 2696522 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 2696522 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 3150416 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 3486572 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile