Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014420 |
| length | 1122 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 1 |
| gene id | AMCG00014420 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 13450098 ~ 13451219 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0003824 | catalytic activity | molecular_function |
| id | description |
|---|---|
| K09627 | PRSS23; serine protease 23 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87409 | lncRNA | upstream | 69694 | 13377534 ~ 13380404 (+) | True | G69961 |
| TU87408 | lncRNA | upstream | 70505 | 13352333 ~ 13379593 (+) | False | G69961 |
| TU87406 | lncRNA | upstream | 114913 | 13334214 ~ 13335185 (+) | True | G69959 |
| TU87357 | lncRNA | upstream | 198366 | 13246309 ~ 13251732 (+) | True | AMCG00014407 |
| TU87358 | lncRNA | upstream | 198366 | 13246309 ~ 13251732 (+) | False | AMCG00014407 |
| TU87516 | lncRNA | downstream | 231824 | 13683043 ~ 13684492 (+) | False | AMCG00014423 |
| TU87518 | lncRNA | downstream | 243596 | 13694815 ~ 13696871 (+) | True | G70054 |
| TU87727 | lncRNA | downstream | 716227 | 14167446 ~ 14171012 (+) | True | G70221 |
| TU87766 | lncRNA | downstream | 742560 | 14193779 ~ 14194433 (+) | False | AMCG00014456 |
| TU87767 | lncRNA | downstream | 746761 | 14197980 ~ 14199308 (+) | False | AMCG00014456 |
| AMCG00014418 | mRNA | upstream | 78722 | 13361748 ~ 13371376 (+) | True | AMCG00014418 |
| AMCG00014419 | mRNA | upstream | 90078 | 13340187 ~ 13360020 (+) | True | AMCG00014419 |
| AMCG00014415 | mRNA | upstream | 119008 | 13323367 ~ 13331090 (+) | True | AMCG00014415 |
| AMCG00014416 | mRNA | upstream | 148225 | 13291329 ~ 13301873 (+) | True | AMCG00014416 |
| AMCG00014417 | mRNA | upstream | 165804 | 13276573 ~ 13284294 (+) | True | AMCG00014417 |
| AMCG00014422 | mRNA | downstream | 139701 | 13590920 ~ 13615018 (+) | True | AMCG00014422 |
| AMCG00014421 | mRNA | downstream | 179448 | 13630667 ~ 13650074 (+) | True | AMCG00014421 |
| AMCG00014423 | mRNA | downstream | 204019 | 13655238 ~ 13689188 (+) | True | AMCG00014423 |
| AMCG00014424 | mRNA | downstream | 292902 | 13744121 ~ 13747498 (+) | True | AMCG00014424 |
| AMCG00014426 | mRNA | downstream | 298454 | 13749673 ~ 13788076 (+) | True | AMCG00014426 |
| TU86705 | other | upstream | 3441450 | 10003058 ~ 10008648 (+) | True | G69406 |
| TU86046 | other | upstream | 6033504 | 7413640 ~ 7416594 (+) | True | G68848 |
| TU86015 | other | upstream | 6100631 | 7346195 ~ 7349467 (+) | True | G68830 |
| TU85565 | other | upstream | 8798134 | 4649200 ~ 4651964 (+) | True | G68475 |
| TU87778 | other | downstream | 885639 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU88057 | other | downstream | 2224412 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU88058 | other | downstream | 2224412 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU88218 | other | downstream | 2678306 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88385 | other | downstream | 3014462 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000299_06476844_06477950.mRNA | True | 3567 | mRNA | 0.45 | 1 | CI01000299 | 6475983 ~ 6479549 (-) |
