RNA id: AMCG00014442



Basic Information


Item Value
RNA id AMCG00014442
length 933
RNA type mRNA
GC content 0.54
exon number 8
gene id AMCG00014442
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13944780 ~ 13965123 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CATTTCGCAAAAAGACGGAAATCGGCATTGGGAATCACGATTGCTCTCTTGGTCCTCTCTGTCATCATCCTGGTGGTAGGGCTGGTGTCAGCCACGCGGGCGGAGAATGTGACCATCGCTGGCTATTACCCAGGGATCGCTCTCAGTTTTGGTGCTTTTCTGGGGATCGTGGGGATTAATCTGGTGGAGAACAGAAAACCAATGCTGGTGGCTTCCATAGTTTTTGTCAGCATCGGAGTCATCGTTGCATTCTTCTGTGCTATAGTGGACGGAGTCATTGCGGCAGAATTCATAGATAGAAGGCCCCTGACTGAAGGAATGTGCCAGTTTTATGCCAGTCCTGGAAAAGCTTATGACAACTACCAAACTGAGGTCACCTGCCCTACCTATGGCAACAGAAAGTGTAAGATAAGGGTGAGAAGTAACACCTGTTACTGCTGCGATCTGTACAACTGTGAGAGCCTTGAGAGCAATGTGCAGTATTATGAGTACACTGGCGTCAACAGCTGCATGGATGTGATTCACCTGTACCGACTGCTGTGGGCCTGCGTTGTCCTCAACGTCGTGGCGCTGTTCCTGGGCATCATCACCGCGGCCATACTGGGAGCCTTCAAAGACATAACACCTGCTGTCCAGACCATGCAGAGCCCTGCTCCTCCTCCCCACATCCTCTACAACCCAACCCAGCATGTCCTCACCTACGCAGGTTTCTGCCCCTCCGGACAGACCCTGCCTGCATATCCCAACTACCCACTGCCTCTGCAGcatcACAGCAACTGTCAGCCCCCACCCCCGTCCTCTGACGCCGCCATGCCCGAAGAGAGCCAAATCCCATCGCAGGCCTCATCCAGTTACATGCTGACGCCCAACGCTCCAGCTCTGTACGGACCTGCTTACAACCCTTTAGAGAAGCCACCTCCCTATGCCTCCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87518 lncRNA upstream 247909 13694815 ~ 13696871 (+) True G70054
TU87516 lncRNA upstream 260288 13683043 ~ 13684492 (+) False AMCG00014423
TU87409 lncRNA upstream 564376 13377534 ~ 13380404 (+) True G69961
TU87408 lncRNA upstream 565187 13352333 ~ 13379593 (+) False G69961
TU87406 lncRNA upstream 609595 13334214 ~ 13335185 (+) True G69959
TU87727 lncRNA downstream 202323 14167446 ~ 14171012 (+) True G70221
TU87766 lncRNA downstream 228656 14193779 ~ 14194433 (+) False AMCG00014456
TU87767 lncRNA downstream 232857 14197980 ~ 14199308 (+) False AMCG00014456
TU87784 lncRNA downstream 501581 14466704 ~ 14467744 (+) True G70271
TU87814 lncRNA downstream 1214722 15179845 ~ 15180820 (+) True G70286
AMCG00014441 mRNA upstream 5675 13930882 ~ 13939105 (+) True AMCG00014441
AMCG00014440 mRNA upstream 23450 13905849 ~ 13921330 (+) True AMCG00014440
AMCG00014439 mRNA upstream 41125 13882719 ~ 13903655 (+) True AMCG00014439
AMCG00014427 mRNA upstream 117229 13820356 ~ 13827551 (+) True AMCG00014427
AMCG00014425 mRNA upstream 130901 13791149 ~ 13813879 (+) True AMCG00014425
AMCG00014444 mRNA downstream 120389 14085512 ~ 14105494 (+) True AMCG00014444
AMCG00014443 mRNA downstream 173283 14138406 ~ 14143073 (+) True AMCG00014443
AMCG00014445 mRNA downstream 186176 14151299 ~ 14157726 (+) True AMCG00014445
AMCG00014446 mRNA downstream 195513 14160636 ~ 14160842 (+) True AMCG00014446
AMCG00014447 mRNA downstream 197002 14162125 ~ 14163322 (+) True AMCG00014447
TU86705 other upstream 3936132 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 6528186 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 6595313 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 9292816 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 371735 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 1710508 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 1710508 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 2164402 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 2500558 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile