RNA id: AMCG00014447



Basic Information


Item Value
RNA id AMCG00014447
length 294
RNA type mRNA
GC content 0.59
exon number 3
gene id AMCG00014447
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14162125 ~ 14163322 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCATTTTCACCAGACTCTGAAAGATGCCTGTGACGAGCATGATCTCAGCTACTACCCGCGCTTTAAGAAGTGGTCAGAGAAGACCTTCGGCTTCGTGCAGCAGTGTGCCGACACCATCCTGCCTGCCTACCTGCCCGTCCTGAAGACACACCTGCACGACCCCTACACTGAGCAGCAGGACTCCTGGCAGCAGCTCAGATATGGCAGATGGGCCTACACATCAGAGCCTGACCCTGGCAGTGCGGAGGCGGGGCTGGTGTCCGTTCTGCGCTGCCCTCGGGACTGGCTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87518 lncRNA upstream 465254 13694815 ~ 13696871 (+) True G70054
TU87516 lncRNA upstream 477633 13683043 ~ 13684492 (+) False AMCG00014423
TU87409 lncRNA upstream 781721 13377534 ~ 13380404 (+) True G69961
TU87408 lncRNA upstream 782532 13352333 ~ 13379593 (+) False G69961
TU87406 lncRNA upstream 826940 13334214 ~ 13335185 (+) True G69959
TU87727 lncRNA downstream 4124 14167446 ~ 14171012 (+) True G70221
TU87766 lncRNA downstream 30457 14193779 ~ 14194433 (+) False AMCG00014456
TU87767 lncRNA downstream 34658 14197980 ~ 14199308 (+) False AMCG00014456
TU87784 lncRNA downstream 303382 14466704 ~ 14467744 (+) True G70271
TU87814 lncRNA downstream 1016523 15179845 ~ 15180820 (+) True G70286
AMCG00014446 mRNA upstream 1283 14160636 ~ 14160842 (+) True AMCG00014446
AMCG00014445 mRNA upstream 4399 14151299 ~ 14157726 (+) True AMCG00014445
AMCG00014443 mRNA upstream 19052 14138406 ~ 14143073 (+) True AMCG00014443
AMCG00014444 mRNA upstream 56631 14085512 ~ 14105494 (+) True AMCG00014444
AMCG00014442 mRNA upstream 197002 13944780 ~ 13965123 (+) True AMCG00014442
AMCG00014456 mRNA downstream 26242 14189564 ~ 14205014 (+) True AMCG00014456
AMCG00014458 mRNA downstream 60194 14223516 ~ 14235412 (+) True AMCG00014458
AMCG00014460 mRNA downstream 74689 14238011 ~ 14241495 (+) True AMCG00014460
AMCG00014461 mRNA downstream 139125 14302447 ~ 14342021 (+) True AMCG00014461
AMCG00014459 mRNA downstream 207823 14371145 ~ 14380019 (+) True AMCG00014459
TU86705 other upstream 4153477 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 6745531 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 6812658 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 9510161 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 173536 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 1512309 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 1512309 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 1966203 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 2302359 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile