Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014466 |
| length | 207 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 3 |
| gene id | AMCG00014466 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 14823792 ~ 14828121 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:0098797 | plasma membrane protein complex | cellular_component |
| id | description |
|---|---|
| ko04020 | Calcium signaling pathway |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87784 | lncRNA | upstream | 356048 | 14466704 ~ 14467744 (+) | True | G70271 |
| TU87767 | lncRNA | upstream | 624484 | 14197980 ~ 14199308 (+) | False | AMCG00014456 |
| TU87766 | lncRNA | upstream | 629359 | 14193779 ~ 14194433 (+) | False | AMCG00014456 |
| TU87727 | lncRNA | upstream | 652780 | 14167446 ~ 14171012 (+) | True | G70221 |
| TU87518 | lncRNA | upstream | 1126921 | 13694815 ~ 13696871 (+) | True | G70054 |
| TU87814 | lncRNA | downstream | 351724 | 15179845 ~ 15180820 (+) | True | G70286 |
| TU87887 | lncRNA | downstream | 411535 | 15239656 ~ 15242333 (+) | False | AMCG00014470 |
| TU87927 | lncRNA | downstream | 522521 | 15350642 ~ 15430852 (+) | True | G70378 |
| TU87973 | lncRNA | downstream | 622657 | 15450778 ~ 15451268 (+) | True | G70409 |
| TU87977 | lncRNA | downstream | 672437 | 15500558 ~ 15500832 (+) | True | G70413 |
| AMCG00014463 | mRNA | upstream | 12657 | 14767487 ~ 14811135 (+) | True | AMCG00014463 |
| AMCG00014465 | mRNA | upstream | 73173 | 14719894 ~ 14750619 (+) | True | AMCG00014465 |
| AMCG00014462 | mRNA | upstream | 131509 | 14684733 ~ 14692283 (+) | True | AMCG00014462 |
| AMCG00014457 | mRNA | upstream | 361684 | 14452526 ~ 14462108 (+) | True | AMCG00014457 |
| AMCG00014459 | mRNA | upstream | 443773 | 14371145 ~ 14380019 (+) | True | AMCG00014459 |
| AMCG00014467 | mRNA | downstream | 92292 | 14920413 ~ 14989067 (+) | True | AMCG00014467 |
| AMCG00014464 | mRNA | downstream | 194878 | 15022999 ~ 15043455 (+) | True | AMCG00014464 |
| AMCG00014469 | mRNA | downstream | 261574 | 15089695 ~ 15137536 (+) | True | AMCG00014469 |
| AMCG00014468 | mRNA | downstream | 336091 | 15164212 ~ 15179155 (+) | True | AMCG00014468 |
| AMCG00014470 | mRNA | downstream | 393793 | 15221914 ~ 15242306 (+) | True | AMCG00014470 |
| TU87778 | other | upstream | 466924 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU86705 | other | upstream | 4815144 | 10003058 ~ 10008648 (+) | True | G69406 |
| TU86046 | other | upstream | 7407198 | 7413640 ~ 7416594 (+) | True | G68848 |
| TU86015 | other | upstream | 7474325 | 7346195 ~ 7349467 (+) | True | G68830 |
| TU85567 | other | upstream | 10171828 | 4649200 ~ 4651964 (+) | False | G68475 |
| TU88057 | other | downstream | 847510 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU88058 | other | downstream | 847510 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU88218 | other | downstream | 1301404 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88385 | other | downstream | 1637560 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
| TU88601 | other | downstream | 2575390 | 17403511 ~ 17448453 (+) | False | AMCG00014553 |
