RNA id: AMCG00014567


Basic Information

Item Value
RNA id AMCG00014567
length 256
RNA type mRNA
GC content 0.53
exon number 3
gene id AMCG00014567
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17990651 ~ 18022095 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CACAACTGGTGAAAAAATTGTAAACATGGCAGGCGCTGCTAATTTGAATGCTGTCCGGGAGACAATGGATGTTCTCCTTGAGATATCCAGGCTTCTGAACACAGGCCTGGACATGGagtctctgtccatctgtgtgcgACTGTGTGAGCAAGGCATCAACCCGGAGGCCCTGTCTTCGGTCATAAAGGAGCTCCGTAAGGCTTCAGATGCGTTTAAAGTTCCTGGGCTCCAGGGGGTGGGCTCCCAGAAGGCCGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU88648 lncRNA downstream 374746 17600461 ~ 17615905 (-) False AMCG00014559
TU88625 lncRNA downstream 541934 17446868 ~ 17448717 (-) False AMCG00014555
TU88592 lncRNA downstream 639679 17349436 ~ 17350972 (-) True G70898
TU88566 lncRNA downstream 706075 17284319 ~ 17284576 (-) True G70876
TU88472 lncRNA downstream 1267101 16722073 ~ 16723550 (-) False AMCG00014539
TU88747 lncRNA upstream 307112 18329197 ~ 18331100 (-) True G71016
TU88951 lncRNA upstream 642179 18664264 ~ 18664631 (-) True G71133
TU88975 lncRNA upstream 646716 18668801 ~ 18669655 (-) True G71157
TU88981 lncRNA upstream 664413 18686498 ~ 18687346 (-) True G71160
TU89001 lncRNA upstream 828639 18850724 ~ 18851111 (-) True G71174
AMCG00014562 mRNA downstream 54937 17935166 ~ 17935714 (-) True AMCG00014562
AMCG00014561 mRNA downstream 182221 17754964 ~ 17808430 (-) True AMCG00014561
AMCG00014559 mRNA downstream 369500 17589267 ~ 17621151 (-) True AMCG00014559
AMCG00014558 mRNA downstream 408577 17572903 ~ 17582074 (-) True AMCG00014558
AMCG00014557 mRNA downstream 424005 17555667 ~ 17566646 (-) True AMCG00014557
AMCG00014566 mRNA upstream 7756 18029841 ~ 18037569 (-) True AMCG00014566
AMCG00014568 mRNA upstream 92926 18115011 ~ 18179286 (-) True AMCG00014568
AMCG00014571 mRNA upstream 241870 18263955 ~ 18291505 (-) True AMCG00014571
AMCG00014572 mRNA upstream 294769 18316854 ~ 18317264 (-) True AMCG00014572
AMCG00014570 mRNA upstream 296000 18318085 ~ 18323699 (-) True AMCG00014570
TU87063 other downstream 6328158 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 7192504 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 8673484 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 9606427 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 9832061 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 10307654 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 11367205 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 14241082 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 14575377 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 14575377 32597462 ~ 32619149 (-) False G73127

Expression Profile