RNA id: AMCG00014610


Basic Information

Item Value
RNA id AMCG00014610
length 3564
RNA type mRNA
GC content 0.39
exon number 10
gene id AMCG00014610
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 19223781 ~ 19236789 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CGAAACGATGCGCCGTCGTCCGTCCCGCCGGGCTGCATCACTCACAGCAATGAGTGCTCAGGGCGAGTATGCCTGAAATCATTGCAACACATTGGTTGGAGACGCAGCATTTTTGTCTTACAATATTGTAGGTGTTTTAATGAAGCGTGCATTATTTGGAGACCTAATTAGTGCCATCATCgactttgtttcattttgagGGACTGGGCGTGGGAGAATTCACTGGAATCATCAAAAGACTGCTGGCGACCCGATTTATTTAATCACCTCGTAAGGAGAGATTTGCCTTGAAGGTGAAAAATGTCTAACTTAAACTGGAAGCCATTTGTTTACGGAGGTTTGGCTTCTGTAACTGCAGAATGTGgtaCCTTCCCCATTGACCTTACTAAGACCCGCTTGCAAGTGCAAGGCCAGGTCGGTGACAGTAAGTACACAGAGATCCGGTACCGGGGAATGCTGCATGCCTTGGGCAGGATCTGCAGAGAAGAAGGGCTCCTAGCGCTGTACTCAGGGATTGCCCCAGCGATGCTGCGGCAGGCGTCCTATGGTACCATCAAGATTGGCGCATATCAGAGCTTTAAACGATTGCTTGTTGACAGTCCAGAAGATGAGACACTAGTGATGAACATGATGTGTGGGGTGCTGTCGGGGGTGATCTCATCTTCAATTGCAAACCCTACCGATGTCCTCAAGATAAGAATGCAGGCACAAGGAAACGTGCTTCAGGGAGGAATGATTGGAAACTTCATTGATATCTATCAGCAGGAAGGGACCCGAGGTTTGTGGAAAggCGTATCCCTGACTGCTCAGAgggcagccattgtggtgggAGTGGAGCTGCCTGCGTATGACCTCACCAAGAAGCACCTCATTCTCTCGGGATACATGGGAGATACTGTCTATACACACTTTCTATCAAGCTTTGTGTGTGGGCTGGCAGGCGCTCTGGCCTCCAATCCTATTGATGTTGTACGGACCCGTATGATGAACCAGCGGGCTCTACTGGATGGAACGTGTGCTGGCTATAAAAGCACGCTGGATTGCCTGTTGCAGACATGGAGAGCTGAAGGTTTCTTTGCACTGTACAAGGGTTTTTTTCCTAACTGGTTGAGGCTGGGGCCATGGAATATTATTTTCTTCATAACATATGAACAGCTGAAGAAGATTGAGGTTTGATTCTGTGTGCTCGATCTGGCTTGAAGAACGCTTCAAAGAGATCAATTCAGTGGCAtctaatgctttaaaatatcaatcTTTTCTTGTATGTGATGCTAAGTGTGTGCTGCCCTTGGACCGGTTATCATTGGAACAGATGAAAGCTGATGGAAACCATATTGATTCTGAAAGCCAGAAATCAGTACTGTTCTTGTCGTGGCCTTAAAAACAATGATTCTAACTGTAGATGGGGGACATCGTATGGCAGACAGTTTTGTGAATGTTATCCGATGAGAAACTCACTTCTGCCTTTTAACTtgttaggtaaaaaaaaaaaagtgtcatcCTGTTTGGATTTTACTACATTTGCATGTTTCAGTGGTCAGATCAGATTAAGCAGTCTGTACCTCAAACGCACGCAacacttttaatataaaatgtctcCCCTGACCTGTTGTACATTTGGTACATGTTAGTTCATTCAAAATCTTACAGTGGCCTATTAGCCTTCTTTACTAGAAAATTAGCCATTGCTCTATTGTGGCAAAAGATGCTTTGGCACAGTATTTACTTTTGTGGAAAACTCTGTATTGAAGGTTGTAGCATATCTGTGGTAAATATAGATCATAcagattaacttttttttatttctacttgAAAATACATTGTGCATCCTGTAAAGAGACCAATTATATTAGGATTTCCTAATTTTTGAAAAGTTAGTGTGAGCTAGTCCAGATCTTGGATCAGAAAGGTCAGTTAACCTACTTATGCATTTATACAGCCCTGACATCACAAAACATATGTGCTCCTTTTGAGAGAGGAATATTGAACCAGGCCTAcatcaaaaatatgaatggaaatgAATGCACCAAAGATGTTTAGTATGTATGAAGGGCTTACAGTTAAATGATGTTGCAGTTCCTCATGGAGAGGAAAGAACTAGTGGGTGGGTTTGGACACCGATTTGTTTGTGTTCTAGTGAATAATTGTATTGCACCCTTTTAAAAACTGGTggtgttatatttgtttttctaaaaatgtcaATGGAAGTCCATTCTTAATCATTGGAAGAGATGTTACACAGTTGCAACCTACATATATTAAGGAATTTCGatgtaatattttcttgtaaTGTTTCAAAACTTGAATCAACTGTTTTATGCATGTGCCGGCTTTTGAAATTGGCAATTTCTTGTCTAAAATCTGTCACTGCAAACTTCAGTTTCACTATGAGAAGATGGGATCTTgcacataatatatttaaaattgaaatgtaataagtgtgatctttataaaaatataaacccaTTACTGTAAAAGTAATGATGTAGTCTAAGCTTATTGGTAAAACATTGGCAAAATAAACATGGCCGTGAATTCACGAAATTCAGCCCATTTtgcagattgaaaaaaaaaaaaaaggtaattgtCACACTTTCATTATCCCCCAAATATATTATGAATTGCACTTCTGTATAAAGGCCTTGATAAATGTATTGCCTCTTGATGCAGCTAAGCCAAAGATGATATTTTCATACTgcactttaaatgaaaaagctaATCTAACATCATTTTAAGAGTGGGTTAAACAGTGGCAGTTCCCttattcctcttttttttcataGGTGTTATTAAAAGTGTACTTGAATGACGTGCACACGTTGCTATAAAGGCAGATATTTAAAGATTTCATCATTTCATAATAAGTAACTTGCAATTATGTGATCATCAGCCCATTTTGAAGCATTTCTACTGACATGAGGTTAAATGTGTTCTTCTATATTGACTgccagttaattgttttaggtatatgcattattacaattcTTACAACAGATATGAGtaaagtatttttgtatataatacatGTGGGTCTTTGCAGCAGTTTTGCAGTTTATGGTATATTTTACTCATTGCTACTGAGCAGTGTGGAGCATCAGTTAAACTAAACTGTATAAAGGGACCTTcatttcattcctttttttttcccttcttcacACATGCTCTGTTTCTTTGCCAAACACCACCTGCACACTGCATCAAGCATAGCCTACACTTCATGCAGTGCGTGTATATTAacttgttttgtctgtttgacTTTCATAAAAGCTTCAGGTGTGAAACTGACAGTACTGTACTTGGCATAGAGggatatttttatacatgtgttgtggaaaataaataagcaacatGAAAATGTCTTTGAGAAAGATTGTAAAGATAGGAATAAGTATATTAAATTTTTTTCAGTAATGGGAGTTTATTACTATTGTATAAATGTTGTGAACAGGCTGAATATATGTTCACAGTGTATGCTGcaactgttttgtattgttttgtgacAAAATTCAGTGTTTGGCAATATTGCAGTCAATAAAAAGCTTAAGATATTTTGCTATTGATTCA

Function

GO:

id name namespace
GO:0006839 mitochondrial transport biological_process
GO:0031966 mitochondrial membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15106 SLC25A14_30; solute carrier family 25 (mitochondrial carrier), member 14/30

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89148 lncRNA upstream 862 19218317 ~ 19222919 (+) True G71283
TU89156 lncRNA upstream 862 19218317 ~ 19222919 (+) False G71283
TU89157 lncRNA upstream 862 19218317 ~ 19222919 (+) False G71283
TU89082 lncRNA upstream 175609 19047958 ~ 19048172 (+) True G71237
TU89012 lncRNA upstream 321620 18901225 ~ 18902161 (+) True G71183
TU89246 lncRNA downstream 688113 19924902 ~ 19925198 (+) True G71362
TU89263 lncRNA downstream 949825 20186614 ~ 20186966 (+) True G71378
TU89305 lncRNA downstream 1687779 20924568 ~ 20924837 (+) True G71414
TU89315 lncRNA downstream 2074801 21311590 ~ 21312022 (+) True G71424
TU89346 lncRNA downstream 2882794 22119583 ~ 22122533 (+) True G71452
AMCG00014612 mRNA upstream 7448 19214276 ~ 19216333 (+) True AMCG00014612
AMCG00014613 mRNA upstream 26942 19193419 ~ 19196839 (+) True AMCG00014613
AMCG00014607 mRNA upstream 32828 19184279 ~ 19190953 (+) True AMCG00014607
AMCG00014599 mRNA upstream 167318 19048293 ~ 19056463 (+) True AMCG00014599
AMCG00014598 mRNA upstream 176140 19045683 ~ 19047641 (+) True AMCG00014598
AMCG00014608 mRNA downstream 781 19237570 ~ 19252607 (+) True AMCG00014608
AMCG00014609 mRNA downstream 48544 19285333 ~ 19291750 (+) True AMCG00014609
AMCG00014606 mRNA downstream 59627 19296416 ~ 19317255 (+) True AMCG00014606
AMCG00014611 mRNA downstream 83080 19319869 ~ 19330918 (+) True AMCG00014611
AMCG00014605 mRNA downstream 143642 19380431 ~ 19384319 (+) True AMCG00014605
TU88725 other upstream 949421 18271854 ~ 18274360 (+) True G71004
TU88601 other upstream 1775328 17403511 ~ 17448453 (+) False AMCG00014553
TU88385 other upstream 2754668 16465681 ~ 16469113 (+) False AMCG00014525
TU88218 other upstream 3090979 16129525 ~ 16132802 (+) False AMCG00014508
TU88058 other upstream 3543993 15675631 ~ 15679788 (+) False AMCG00014490
TU89430 other downstream 3618553 22855342 ~ 22855646 (+) True G71525
TU90165 other downstream 8598714 27835503 ~ 27841871 (+) True AMCG00014704
TU90175 other downstream 8631914 27868703 ~ 27879800 (+) True AMCG00014703
TU90214 other downstream 9065584 28302373 ~ 28304073 (+) True G72175
TU90740 other downstream 10614661 29851450 ~ 29851821 (+) True G72605

Expression Profile