RNA id: AMCG00014699


Basic Information

Item Value
RNA id AMCG00014699
length 954
RNA type mRNA
GC content 0.53
exon number 5
gene id AMCG00014699
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 27381186 ~ 27386627 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGAAGAAGCTGCTAGTTAATGTGGACTGTGGTGTGGATGATGCCCAGGCCATAATGCTGGCCCTGGCTGACCCTGATGTGCAGATTCTGGGCATCACCTGTGTACGTGGGAACACGTCTCTTGACAACGTGTGCAAAAATGTGCTGCGTGTGCTCAAGGTCTGCCAGCGACTTGAGATCCCAGTTTTCAGAGGCGCCTCCAGTTCACTCCTGAGCGAGGTCCTGAACGCCAGTCACATCCATGGGGAGGACGGTCTGGGGGACGCCCCTGATCCGGAGGCCCCAGGGCTGGAGCACGTCCAGAAGGAAGGGGCGGTGCAGGCCATGATCCGGATCGTCACAGAGCATGAAGGCCAGGTCACTCTTGTTGCTACCGGCCCTTTGACAAACCTGGCTCTCGCTGTGAAGATAGATCCCAGCTTTCCCCAGAAACTGAAGggactgtacatcatgggaggAAACACAGAGTCACGAGGCAACACTACCGTCTGTGGAGAGTTTAACTTCACTGCCGATCCAGAAGCTGCTTACATTGTGCTAAACGACTACCTGTGTCCAACCTACCTTACCACCTGGGAGTTCCTGTGTATGAGCAAGATCCCCTGGGAATTCTGTGGACCATGGCTGGACAAAAACTCTGAGAAGGCCAGGTTCATGAAGAAGATATTCAGGTACAGCATGGAGATGGTTAAAACCTACAGGCACCAGGAGATGATGGGGGAAGACGAATTCATATCCTGTGACTCCTACGCCATGGCAGCCGCTATAGATTGCTCCGTCATCACAGAGTTGGAGGAGTGGCCGGTCAGTGTGGAGCTCTCCGGGAGGCTGACCCGAGGCATGATGGTGCTCGACAAACCGGGCTTCCTCCAAAAAGAGCACAAAGTCTTTATCATCAAGAAGTGTGACCTGGAGAAGTTTAAAAGTATGATGATGACAGCTCTGAAATGA

Function

GO: NA

KEGG:

id description
K01240 URH1; uridine nucleosidase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90042 lncRNA downstream 38436 27335695 ~ 27342750 (-) False AMCG00014692
TU90016 lncRNA downstream 76589 27285420 ~ 27304597 (-) True AMCG00014693
TU89953 lncRNA downstream 448549 26932268 ~ 26932637 (-) True G71961
TU89858 lncRNA downstream 1046186 26334655 ~ 26335000 (-) True G71882
TU89856 lncRNA downstream 1056932 26324038 ~ 26324254 (-) True G71880
TU90058 lncRNA upstream 32189 27418816 ~ 27419045 (-) True G72049
TU90102 lncRNA upstream 143669 27530296 ~ 27530643 (-) True G72089
TU90167 lncRNA upstream 449712 27836339 ~ 27837927 (-) True G72139
TU90174 lncRNA upstream 470112 27856739 ~ 27861375 (-) True G72146
TU90346 lncRNA upstream 1191782 28578409 ~ 28578734 (-) True G72280
AMCG00014700 mRNA downstream 3414 27373072 ~ 27377772 (-) True AMCG00014700
AMCG00014692 mRNA downstream 11659 27337698 ~ 27369527 (-) True AMCG00014692
AMCG00014693 mRNA downstream 76686 27298451 ~ 27304500 (-) False AMCG00014693
AMCG00014689 mRNA downstream 191668 27179103 ~ 27189518 (-) True AMCG00014689
AMCG00014688 mRNA downstream 347167 26980121 ~ 27034019 (-) True AMCG00014688
AMCG00014698 mRNA upstream 10600 27397227 ~ 27404919 (-) True AMCG00014698
AMCG00014695 mRNA upstream 33424 27420051 ~ 27421669 (-) True AMCG00014695
AMCG00014694 mRNA upstream 44624 27431251 ~ 27440929 (-) True AMCG00014694
AMCG00014696 mRNA upstream 54726 27441353 ~ 27466854 (-) True AMCG00014696
AMCG00014697 mRNA upstream 83662 27470289 ~ 27482680 (-) True AMCG00014697
TU87063 other downstream 15718693 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 16583039 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 18064019 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 18996962 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 19222596 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 943112 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 2002663 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 4876540 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 5210835 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 5210835 32597462 ~ 32619149 (-) False G73127

Expression Profile