Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014714 |
| length | 940 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 6 |
| gene id | AMCG00014714 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 28329797 ~ 28332468 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0015934 | large ribosomal subunit | cellular_component |
| GO:0019843 | rRNA binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02938 | RP-L8e, RPL8; large subunit ribosomal protein L8e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90212 | lncRNA | upstream | 28984 | 28297669 ~ 28300813 (+) | True | G72173 |
| TU90207 | lncRNA | upstream | 32313 | 28240566 ~ 28297484 (+) | True | G72169 |
| TU90084 | lncRNA | upstream | 850353 | 27475064 ~ 27479444 (+) | True | G72072 |
| TU89992 | lncRNA | upstream | 1302525 | 27026775 ~ 27027272 (+) | True | G71995 |
| TU89956 | lncRNA | upstream | 1376544 | 26952296 ~ 26953253 (+) | True | G71963 |
| TU90255 | lncRNA | downstream | 4823 | 28337291 ~ 28341717 (+) | True | G72208 |
| TU90338 | lncRNA | downstream | 194320 | 28526788 ~ 28578733 (+) | True | G72273 |
| TU90404 | lncRNA | downstream | 499288 | 28831756 ~ 28831975 (+) | True | G72329 |
| TU90400 | lncRNA | downstream | 503814 | 28836282 ~ 28837910 (+) | False | AMCG00014729 |
| TU90416 | lncRNA | downstream | 586508 | 28918976 ~ 28921290 (+) | True | G72341 |
| AMCG00014710 | mRNA | upstream | 49073 | 28250926 ~ 28280724 (+) | True | AMCG00014710 |
| AMCG00014709 | mRNA | upstream | 93882 | 28222661 ~ 28235915 (+) | True | AMCG00014709 |
| AMCG00014711 | mRNA | upstream | 145267 | 28167033 ~ 28184530 (+) | True | AMCG00014711 |
| AMCG00014708 | mRNA | upstream | 410874 | 27891851 ~ 27918923 (+) | True | AMCG00014708 |
| AMCG00014703 | mRNA | upstream | 450042 | 27868715 ~ 27879755 (+) | False | AMCG00014703 |
| AMCG00014721 | mRNA | downstream | 74749 | 28407217 ~ 28441529 (+) | True | AMCG00014721 |
| AMCG00014722 | mRNA | downstream | 112508 | 28444976 ~ 28450107 (+) | True | AMCG00014722 |
| AMCG00014720 | mRNA | downstream | 123727 | 28456195 ~ 28483850 (+) | True | AMCG00014720 |
| AMCG00014724 | mRNA | downstream | 251001 | 28583469 ~ 28590960 (+) | True | AMCG00014724 |
| AMCG00014723 | mRNA | downstream | 258610 | 28591078 ~ 28609187 (+) | True | AMCG00014723 |
| TU90214 | other | upstream | 25724 | 28302373 ~ 28304073 (+) | True | G72175 |
| TU90175 | other | upstream | 449997 | 27868703 ~ 27879800 (+) | True | AMCG00014703 |
| TU90165 | other | upstream | 487926 | 27835503 ~ 27841871 (+) | True | AMCG00014704 |
| TU89430 | other | upstream | 5474151 | 22855342 ~ 22855646 (+) | True | G71525 |
| TU88725 | other | upstream | 10055437 | 18271854 ~ 18274360 (+) | True | G71004 |
| TU90740 | other | downstream | 1518982 | 29851450 ~ 29851821 (+) | True | G72605 |
| TU90928 | other | downstream | 2431883 | 30764351 ~ 30805741 (+) | False | AMCG00014777 |
| TU90965 | other | downstream | 2645748 | 30978216 ~ 30978825 (+) | True | G72785 |
| TU90966 | other | downstream | 2647102 | 30979570 ~ 30980252 (+) | True | G72786 |
| TU90967 | other | downstream | 2657595 | 30990063 ~ 30996363 (+) | True | G72787 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00074522 | False | 926 | mRNA | 0.54 | 6 | NC_007120.7 | 33323104 ~ 33329787 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000009_02591882_02593586.mRNA | True | 968 | mRNA | 0.50 | 5 | CI01000009 | 2591863 ~ 2593761 (-) |
