RNA id: AMCG00014719


Basic Information

Item Value
RNA id AMCG00014719
length 339
RNA type mRNA
GC content 0.42
exon number 2
gene id AMCG00014719
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 28494106 ~ 28494486 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATCAGGTATTTGGCTTGGGTGAAATGTATGGTTGTAATCATGAAGATCTTACTCATCAGCTTCACCAGGCTAGGAGAATTTGGAAAAGGAAGGCTGAGAGTGGGGCAGCTGTGCAAAGTAGCTTTAGCCCTTCCAGTCAGCAGTGCTGCCTGTGAGCGGAGCTTTTCAGCTCTaaatctcattaaaaataattttcagacAACCATGGTAGATGGCAGGCTAAGCCATTTAGGTGTGCTAAGCATTGAATCAAGAAGAGCTAAGGCATTGAACATGGTTGACTTCATAAAAGTGTTTGCAAGCCAATACAAGAACAGGCTAAttgaacacttttaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90174 lncRNA downstream 632731 27856739 ~ 27861375 (-) True G72146
TU90167 lncRNA downstream 656179 27836339 ~ 27837927 (-) True G72139
TU90102 lncRNA downstream 963463 27530296 ~ 27530643 (-) True G72089
TU90058 lncRNA downstream 1075061 27418816 ~ 27419045 (-) True G72049
TU90042 lncRNA downstream 1151356 27335695 ~ 27342750 (-) False AMCG00014692
TU90346 lncRNA upstream 83923 28578409 ~ 28578734 (-) True G72280
TU90377 lncRNA upstream 152009 28646495 ~ 28646811 (-) True G72305
TU90378 lncRNA upstream 161080 28655566 ~ 28655765 (-) True G72306
TU90379 lncRNA upstream 163591 28658077 ~ 28658299 (-) True G72307
TU90391 lncRNA upstream 179895 28674381 ~ 28766089 (-) False G72317
AMCG00014717 mRNA downstream 3543 28487629 ~ 28490563 (-) True AMCG00014717
AMCG00014716 mRNA downstream 114053 28341151 ~ 28380053 (-) True AMCG00014716
AMCG00014715 mRNA downstream 178708 28289355 ~ 28315398 (-) True AMCG00014715
AMCG00014713 mRNA downstream 273620 28219392 ~ 28220486 (-) True AMCG00014713
AMCG00014712 mRNA downstream 289145 28061628 ~ 28204961 (-) True AMCG00014712
AMCG00014718 mRNA upstream 21 28494507 ~ 28495026 (-) True AMCG00014718
AMCG00014730 mRNA upstream 435879 28930365 ~ 28951352 (-) True AMCG00014730
AMCG00014731 mRNA upstream 501450 28995936 ~ 29013055 (-) True AMCG00014731
AMCG00014732 mRNA upstream 529292 29023778 ~ 29031908 (-) True AMCG00014732
AMCG00014735 mRNA upstream 857262 29351748 ~ 29383448 (-) True AMCG00014735
TU90285 other downstream 161624 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 16831613 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 17695959 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 19176939 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 20109882 8383285 ~ 8384224 (-) True G69156
TU90581 other upstream 894804 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 3768681 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 4102976 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 4102976 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 4307372 32801858 ~ 32806295 (-) True AMCG00014824

Expression Profile