RNA id: AMCG00014747



Basic Information


Item Value
RNA id AMCG00014747
length 597
RNA type mRNA
GC content 0.48
exon number 6
gene id AMCG00014747
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 29653193 ~ 29657089 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACACAGGACGTTGTTGTTGGCATGGAGAGCTGTGCCATCACGGTGCTGAAGAGGGCCGTGGAGCTCGACACAAGCGCACGCTTCCAGGAGTCTCTCGATGACTCAAAGAAGGCACACTACAGGGGGAAGATCAAGGGGTACATGGAAAGAGCAGAGCAGATCAAAGTCCACTTGCAACAAGCAAAAGAAGAAGGTAAATATCACGAGCAGATAAAAATCACAGAGAATGCCACAGGCTACAGCTATGAGAAACTTTTCAAGCCTTACATCACCGAGGCCTTAACGGAAGTCTGTGTGGAAGATCCCTACATCAGACACATTCATCAGCTGTATAACTTCTTGCGGTTCTGTGAAATGCTGTTAAAGGCTCCTTGCAAAGTCAAAAAGATTAATCTCCTGACATCTCGGGATGAAGGTGAAAGCAACTCACTGCAAGCTACTGTGCTTCATGAGATCACGCAGTCCCTGCAGAGTCATGGGGTAGCACTGGACACTCAATTTTCCTCCACCATTCACGACCGGGAAATCAGGTTCAACAATGGCTGGATAATCAAGATTGGAAGAGGCCTGGACTACTTTAAGAAGCCACAGGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU90544 lncRNA upstream 380675 29268329 ~ 29272518 (+) False AMCG00014738
TU90543 lncRNA upstream 380675 29270851 ~ 29272518 (+) False AMCG00014738
TU90536 lncRNA upstream 400488 29249246 ~ 29252705 (+) True AMCG00014739
TU90518 lncRNA upstream 460915 29191971 ~ 29192278 (+) True G72426
TU90507 lncRNA upstream 492768 29157025 ~ 29160425 (+) True G72415
TU90738 lncRNA downstream 186378 29843467 ~ 29846586 (+) True AMCG00014757
TU90938 lncRNA downstream 1179747 30836836 ~ 30837169 (+) True G72767
TU90940 lncRNA downstream 1184471 30841560 ~ 30844670 (+) True G72768
TU90941 lncRNA downstream 1189073 30846162 ~ 30846421 (+) True G72769
TU90963 lncRNA downstream 1298816 30955905 ~ 30956284 (+) True G72783
AMCG00014745 mRNA upstream 3383 29643776 ~ 29649810 (+) True AMCG00014745
AMCG00014746 mRNA upstream 39156 29588801 ~ 29614037 (+) True AMCG00014746
AMCG00014743 mRNA upstream 94492 29540531 ~ 29558701 (+) True AMCG00014743
AMCG00014736 mRNA upstream 216086 29431521 ~ 29437107 (+) True AMCG00014736
AMCG00014740 mRNA upstream 231814 29400632 ~ 29421379 (+) True AMCG00014740
AMCG00014753 mRNA downstream 2455 29659544 ~ 29684659 (+) True AMCG00014753
AMCG00014752 mRNA downstream 51316 29708405 ~ 29733622 (+) True AMCG00014752
AMCG00014751 mRNA downstream 78802 29735891 ~ 29739643 (+) True AMCG00014751
AMCG00014754 mRNA downstream 130637 29787726 ~ 29829991 (+) True AMCG00014754
AMCG00014757 mRNA downstream 186501 29843590 ~ 29844077 (+) False AMCG00014757
TU90214 other upstream 1349120 28302373 ~ 28304073 (+) True G72175
TU90175 other upstream 1773393 27868703 ~ 27879800 (+) True AMCG00014703
TU90165 other upstream 1811322 27835503 ~ 27841871 (+) True AMCG00014704
TU89430 other upstream 6797547 22855342 ~ 22855646 (+) True G71525
TU88725 other upstream 11378833 18271854 ~ 18274360 (+) True G71004
TU90740 other downstream 194361 29851450 ~ 29851821 (+) True G72605
TU90928 other downstream 1107262 30764351 ~ 30805741 (+) False AMCG00014777
TU90965 other downstream 1321127 30978216 ~ 30978825 (+) True G72785
TU90966 other downstream 1322481 30979570 ~ 30980252 (+) True G72786
TU90967 other downstream 1332974 30990063 ~ 30996363 (+) True G72787

Expression Profile