RNA id: AMCG00014758


Basic Information

Item Value
RNA id AMCG00014758
length 525
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00014758
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 29950031 ~ 29951305 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGAAAGGTATACGATGCCTATGTCATATACTATAAGACCAGCAGTACAACGCAAATTGATAATGAAGAAAGGGAGATCATACTAAACTTGTTGGAGAGCCACTACGGTTATCAACTTTGTCTTTTTGACCGTGATGTTCTTCCAGGAGGAGCGTTTGCTGACACAGTGCTGGAGTACATTGACAAGAGCAGGCGACTGATAATGATACCCAGTACAGACTGCAGGGACGAGAGTCAGTATGAGCTTGTAACAGGTCTGCATAACGCTCTGGTGGACAGGAAAATGCAAATCGTCTTTATTGAATATGACTCAGCCACGGATATGGACTTGCTGCCGGAGTCACTCAGGCTTCTTGTAAAGTCAAATGGGATGGTGAAGTGGAAGGGCAGGAAATCAATAGACTATCGCTCACCTTTCTGGAAGAAACTCCGCTACATGATGCCAGCAAAGAAACTGCTAATGTCTAGTTCAGAGGAGGAATTCTTGCTCTCAGTGCAGCAAAAAAGCATTGCAGAAAGCAATCCA

Function

GO: NA

KEGG:

id description
K05173 IL18R1, IL1RRP, CD218a; interleukin 18 receptor 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90767 lncRNA downstream 2970 29946717 ~ 29947061 (-) True G72629
TU90712 lncRNA downstream 206819 29739207 ~ 29743212 (-) True G72581
TU90650 lncRNA downstream 300389 29647588 ~ 29649642 (-) True G72530
TU90655 lncRNA downstream 387965 29560538 ~ 29562066 (-) True G72535
TU90604 lncRNA downstream 526659 29421260 ~ 29423372 (-) True G72495
TU90785 lncRNA upstream 17350 29968655 ~ 29982575 (-) True G72642
TU90789 lncRNA upstream 103035 30054340 ~ 30055173 (-) True G72646
TU90803 lncRNA upstream 215412 30166717 ~ 30166926 (-) True G72659
TU90829 lncRNA upstream 259837 30211142 ~ 30211396 (-) True G72680
TU90837 lncRNA upstream 310032 30261337 ~ 30261604 (-) True G72685
AMCG00014759 mRNA downstream 9148 29915255 ~ 29940883 (-) True AMCG00014759
AMCG00014755 mRNA downstream 97073 29843424 ~ 29852958 (-) True AMCG00014755
AMCG00014756 mRNA downstream 108874 29835251 ~ 29841157 (-) True AMCG00014756
AMCG00014749 mRNA downstream 290646 29658273 ~ 29659385 (-) True AMCG00014749
AMCG00014750 mRNA downstream 298722 29650438 ~ 29651309 (-) True AMCG00014750
AMCG00014762 mRNA upstream 260833 30212138 ~ 30217061 (-) True AMCG00014762
AMCG00014763 mRNA upstream 669200 30620505 ~ 30627347 (-) True AMCG00014763
AMCG00014764 mRNA upstream 679131 30630436 ~ 30646339 (-) True AMCG00014764
AMCG00014765 mRNA upstream 717221 30668526 ~ 30689037 (-) True AMCG00014765
AMCG00014766 mRNA upstream 737737 30689042 ~ 30695325 (-) True AMCG00014766
TU90581 other downstream 551726 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 1617549 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 18287538 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 19151884 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 20632864 9310451 ~ 9317167 (-) True AMCG00014328
TU91283 other upstream 2311862 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 2646157 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 2646157 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 2850553 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 4818278 34769583 ~ 34769979 (-) True G73328

Expression Profile