RNA id: AMCG00014777


Basic Information

Item Value
RNA id AMCG00014777
length 432
RNA type mRNA
GC content 0.41
exon number 3
gene id AMCG00014777
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30764351 ~ 30812287 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TACCATGGCATTGAGAAAGATATTAATCTGCCCGCTATCGCTGTGATTGGGGATCAGAGCTCGGGAAAGAGCTCAGTGCTGGAGGCTCTGTCTGGAattaaaagACTGATATTGAAATTCATTTCAAAGAATGAAACCATTAATTTGGTTGTTGTGCCCTGCAATGTGGACATCGCAACCACAGAAGCCTTGAAGATGGCCCAGGAGGTAGATCCTAATGGAGAAAGAACACTGGCAATTTTGACCAAACCTGATCTGCTTGACAAAGGGACAGAACAGAATATTGTGGACATTGTCCAAAACAAAGTTATTCACCTCAGTAAAGGCTACATGATTGTAAAATGCCATGGTCAACAGCAAATCAATGAAAAAGTTACACTGGCTAAAGCAACCAAGGATGAGATAGAATTCTTCAAGAAACATCAACATTTC

Function

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90738 lncRNA upstream 959037 29843467 ~ 29846586 (+) True AMCG00014757
TU90544 lncRNA upstream 1533105 29268329 ~ 29272518 (+) False AMCG00014738
TU90543 lncRNA upstream 1533105 29270851 ~ 29272518 (+) False AMCG00014738
TU90536 lncRNA upstream 1552918 29249246 ~ 29252705 (+) True AMCG00014739
TU90518 lncRNA upstream 1613345 29191971 ~ 29192278 (+) True G72426
TU90938 lncRNA downstream 24549 30836836 ~ 30837169 (+) True G72767
TU90940 lncRNA downstream 29273 30841560 ~ 30844670 (+) True G72768
TU90941 lncRNA downstream 33875 30846162 ~ 30846421 (+) True G72769
TU90963 lncRNA downstream 143618 30955905 ~ 30956284 (+) True G72783
TU90969 lncRNA downstream 191085 31003372 ~ 31003788 (+) True G72789
AMCG00014768 mRNA upstream 64479 30728363 ~ 30741144 (+) True AMCG00014768
AMCG00014774 mRNA upstream 95203 30700206 ~ 30710420 (+) True AMCG00014774
AMCG00014779 mRNA upstream 145028 30659601 ~ 30660595 (+) True AMCG00014779
AMCG00014772 mRNA upstream 195519 30594129 ~ 30610104 (+) True AMCG00014772
AMCG00014770 mRNA upstream 257101 30545213 ~ 30548522 (+) True AMCG00014770
AMCG00014771 mRNA downstream 34885 30847172 ~ 30851142 (+) True AMCG00014771
AMCG00014781 mRNA downstream 94882 30907169 ~ 30917566 (+) True AMCG00014781
AMCG00014784 mRNA downstream 211256 31023543 ~ 31027002 (+) True AMCG00014784
AMCG00014783 mRNA downstream 229604 31041891 ~ 31044741 (+) True AMCG00014783
AMCG00014786 mRNA downstream 333482 31145769 ~ 31146137 (+) False AMCG00014786
TU90740 other upstream 953802 29851450 ~ 29851821 (+) True G72605
TU90214 other upstream 2501550 28302373 ~ 28304073 (+) True G72175
TU90175 other upstream 2925823 27868703 ~ 27879800 (+) True AMCG00014703
TU90165 other upstream 2963752 27835503 ~ 27841871 (+) True AMCG00014704
TU89430 other upstream 7949977 22855342 ~ 22855646 (+) True G71525
TU90965 other downstream 165929 30978216 ~ 30978825 (+) True G72785
TU90966 other downstream 167283 30979570 ~ 30980252 (+) True G72786
TU90967 other downstream 177776 30990063 ~ 30996363 (+) True G72787
TU91144 other downstream 904831 31717118 ~ 31754930 (+) True G72925
TU91344 other downstream 1730223 32542510 ~ 32561489 (+) True G73103

Expression Profile