RNA id: AMCG00014809


Basic Information

Item Value
RNA id AMCG00014809
length 568
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00014809
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31967444 ~ 31969223 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AAATATTGTATCATGATCCAGGGCTAGGTAGCTACACTGTCCTACATAAAGGCCCATTCTGCTGTTCAGTGTCCAGTCCCTCTCTTCAGTGTGAAAAGCAGTAGAAGATGGCAGACTACTGGCAGTTCCTCTGCATTCTCCTCTCCTCAGCTCTCCTCACTGTGTCAGCAGCTCCTCTAGAAGTGGTTGATGCCGATCCCAACAGCGAAGAGGTGTACGGCTCCACTGCCTTCGCCCTGGAGTCCTTCAATTACTTCAGCAAGGAGCCCTACCTCTACAAAATCACCAAGTTCGACACAGTGACAATGAAGGCCATCGGTGGAGGGGAGTACACAATGGACGTGGAGCTGCAGCTCACCCAGTGTAAGAAAGGAGAGAGCACTGGCTTGGAGTCTTGCCCAGTTATGACAGCCCCTGCACAAGCAAAGGCCctccagtgtgtgtttgtggtgctGAATGTTCCCTGGAGGCACCAGAGAGTGCTGATTAAGAGCAACTGCAGCCCAAAATAACTGGGACAGTGAGGAGTTGTGTTCCATACCTCCAATTCTTCTCCATTACAGTGTGT

Function

GO:

id name namespace
GO:0050790 regulation of catalytic activity biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91232 lncRNA downstream 68499 31896940 ~ 31898945 (-) True G73005
TU91136 lncRNA downstream 269432 31697655 ~ 31698012 (-) True G72919
TU91074 lncRNA downstream 447512 31515430 ~ 31519932 (-) False G72874
TU91073 lncRNA downstream 447595 31515430 ~ 31519849 (-) True G72874
TU91062 lncRNA downstream 481978 31480848 ~ 31485466 (-) True G72867
TU91282 lncRNA upstream 286932 32256155 ~ 32256775 (-) True G73046
TU91285 lncRNA upstream 295909 32265132 ~ 32265424 (-) True G73049
TU91304 lncRNA upstream 388479 32357702 ~ 32362393 (-) True G73066
TU91322 lncRNA upstream 461374 32430597 ~ 32430951 (-) True G73082
TU91351 lncRNA upstream 481199 32450422 ~ 32466416 (-) True G73106
AMCG00014806 mRNA downstream 177707 31769573 ~ 31789737 (-) True AMCG00014806
AMCG00014797 mRNA downstream 259922 31700627 ~ 31707522 (-) True AMCG00014797
AMCG00014795 mRNA downstream 347067 31594391 ~ 31620377 (-) True AMCG00014795
AMCG00014794 mRNA downstream 388856 31528997 ~ 31578588 (-) True AMCG00014794
AMCG00014796 mRNA downstream 495822 31469559 ~ 31471622 (-) True AMCG00014796
AMCG00014813 mRNA upstream 301462 32270685 ~ 32285936 (-) True AMCG00014813
AMCG00014814 mRNA upstream 352751 32321974 ~ 32322759 (-) True AMCG00014814
AMCG00014816 mRNA upstream 533094 32502317 ~ 32555533 (-) True AMCG00014816
AMCG00014820 mRNA upstream 659609 32628832 ~ 32641932 (-) True AMCG00014820
AMCG00014819 mRNA upstream 678311 32647534 ~ 32648995 (-) True AMCG00014819
TU90581 other downstream 2569139 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 3634962 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 20304951 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 21169297 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 22650277 9310451 ~ 9317167 (-) True AMCG00014328
TU91283 other upstream 293944 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 628239 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 628239 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 832635 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 2800360 34769583 ~ 34769979 (-) True G73328

Expression Profile