RNA id: AMCG00014816


Basic Information

Item Value
RNA id AMCG00014816
length 1002
RNA type mRNA
GC content 0.45
exon number 8
gene id AMCG00014816
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32455306 ~ 32555945 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCAAAAGGCTACATTGGAGCGGAGAGCATACAGGTGTCTCTCAATGACCAGCTTCTGAATGAGTCCAGAATGAAAACCATTCTGCTGTTCCTTATGTCCCTAGATTTCTCAGtgtatcACCTTAAAATCAATCCAGTAACCTCAGTCACCAAAGGCCTAAAATTCATCAGCAACACCAGCTTTGTAGTTACAGTTGGTGAGGATGCTTATTTGGGCTGCACCACTGAGAACCCCTCACAAGCCTTGTCTCAGATAAGCTGGCAGAGACCAGAGGGTGTGAACTTTTATGTCTTTACGCCTGAGAATGGAGCTGAAGCTGTGAATGAATTTGGGAAAAGAGTGAAATTCAACAGGATAGGCAATTGGGATGGTTCCATTGTCATACAGAATGCTTGTCTCTCTGATGAAGGCGTTTACATTTGCATCTTTACCATCTTCCCCAGTGGACCATTTCACTTTTCAGTGACACTCACTGTACAGGTGAAGCCTGTGCTCACGGTGTCCACAGAAGGTCTTACTGAAGAAAGCCATAGAGAAACACATATTGCGACCTGCAGAGTGGAGCATGGCAAACCAGAGGCCACAATCACTTGGGAAACTCCTTTTCCTAAACACAAGTCTGTGGAAACCTCATTAATGAATGAAGACTGTACAATTACCATAGAGAGCCAACTGAGAGCCATCCCAACCCGCTCAGAACATGGCCAGGAGGTGCATTGCATTGTGGAGCACCCAACATTCCAAAAGCCGGAAGTGGCTTCTGCCAGGCTAAATATACAGTaTCCTCCTAATTTGACAGTAAAACAGTTGAATCCAGATGCACTGATCTTCCAGTGTGAAGCAGACGCTAACCCACCGGTGGAAGAATATGTTTGGACACGTTCTCCACAAAGTCGTCTGATGTCAATGGGATGTACCACTGTGAAGCGAAAACCCATAACACCTCTGCAAGAGCACAACTTTACCTTCAAAtctGTGATAAATAGAGGGGTGGTGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91351 lncRNA downstream 35901 32450422 ~ 32466416 (-) True G73106
TU91322 lncRNA downstream 71366 32430597 ~ 32430951 (-) True G73082
TU91304 lncRNA downstream 139924 32357702 ~ 32362393 (-) True G73066
TU91285 lncRNA downstream 236893 32265132 ~ 32265424 (-) True G73049
TU91282 lncRNA downstream 245542 32256155 ~ 32256775 (-) True G73046
TU91363 lncRNA upstream 14138 32569671 ~ 32574686 (-) True G73117
TU91379 lncRNA upstream 72996 32628529 ~ 32630521 (-) True G73132
TU91436 lncRNA upstream 152480 32708013 ~ 32708283 (-) True G73181
TU91437 lncRNA upstream 154311 32709844 ~ 32710115 (-) True G73182
TU91438 lncRNA upstream 155264 32710797 ~ 32711045 (-) True G73183
AMCG00014814 mRNA downstream 179558 32321974 ~ 32322759 (-) True AMCG00014814
AMCG00014813 mRNA downstream 216381 32270685 ~ 32285936 (-) True AMCG00014813
AMCG00014809 mRNA downstream 533094 31967444 ~ 31969223 (-) True AMCG00014809
AMCG00014806 mRNA downstream 712580 31769573 ~ 31789737 (-) True AMCG00014806
AMCG00014797 mRNA downstream 794795 31700627 ~ 31707522 (-) True AMCG00014797
AMCG00014820 mRNA upstream 73299 32628832 ~ 32641932 (-) True AMCG00014820
AMCG00014819 mRNA upstream 92001 32647534 ~ 32648995 (-) True AMCG00014819
AMCG00014818 mRNA upstream 94643 32650176 ~ 32653420 (-) True AMCG00014818
AMCG00014823 mRNA upstream 236348 32791881 ~ 32793425 (-) True AMCG00014823
AMCG00014824 mRNA upstream 239472 32795005 ~ 32806293 (-) False AMCG00014824
TU91283 other downstream 238890 32263167 ~ 32263427 (-) True G73047
TU90581 other downstream 3104012 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 4169835 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 20839824 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 21704170 10796716 ~ 10798147 (-) True G69537
TU91373 other upstream 41929 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 41929 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 246325 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 2214050 34769583 ~ 34769979 (-) True G73328
TU91914 other upstream 3025093 35580626 ~ 35608677 (-) True AMCG00014839

Expression Profile