RNA id: AMCG00014819



Basic Information


Item Value
RNA id AMCG00014819
length 558
RNA type mRNA
GC content 0.67
exon number 2
gene id AMCG00014819
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32647534 ~ 32648995 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGACTCAGCCTGGCCGACCCACTTCTCCATCAGAACCGAGCCATTGGGGGCCCTTGAGATCCCCGGCTCGCCCTACTCCTTAGCGGTCCTGAAGGAGGGCTACTGCCTGCCCCAGCCGGACGGTTCGACCCGGGCAGACGGGACCATCACCCTTGTCTCTGGGCCTGGAAACCAGGTGCTTGTGGACACTGGGGGCCCCTGGGATCGGGATGTCCTGCTAGCCCAGCTGGGGCAGCGGGGGCTGGGCCCGGGGGATGTGGGCTGGGTGGTGTGTACCCACGGACACTCCGACCACGTGGGCAATCTGGGATTGTTCCCCAGCGCAACCCTGGCCGTGGGCTTTGATGTGTGCCAGGGGGACCGGTACCTCTGCACCGAACTAGCCCAGGGGCGGCCCTACCCTATCGACCCGCACGTGAATGAGCCCGGCTGGCGGGAGCTGAGCGAGAACCCCTCCCTGCAGGAACGCAGCCGTCGGGCAGCACTGGAGTCCACTGATGTCATCATCCCGGGACACGGGCCGCCCTTTAGGGTGTACAGGGATCCCCGGCCCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91379 lncRNA downstream 17013 32628529 ~ 32630521 (-) True G73132
TU91363 lncRNA downstream 72848 32569671 ~ 32574686 (-) True G73117
TU91353 lncRNA downstream 91589 32455306 ~ 32555945 (-) False AMCG00014816
TU91358 lncRNA downstream 123732 32523238 ~ 32523802 (-) True G73112
TU91351 lncRNA downstream 181118 32450422 ~ 32466416 (-) True G73106
TU91436 lncRNA upstream 59018 32708013 ~ 32708283 (-) True G73181
TU91437 lncRNA upstream 60849 32709844 ~ 32710115 (-) True G73182
TU91438 lncRNA upstream 61802 32710797 ~ 32711045 (-) True G73183
TU91439 lncRNA upstream 62252 32711247 ~ 32711703 (-) True G73184
TU91443 lncRNA upstream 140028 32789023 ~ 32790398 (-) True G73187
AMCG00014820 mRNA downstream 5602 32628832 ~ 32641932 (-) True AMCG00014820
AMCG00014816 mRNA downstream 92001 32502317 ~ 32555533 (-) True AMCG00014816
AMCG00014814 mRNA downstream 324775 32321974 ~ 32322759 (-) True AMCG00014814
AMCG00014813 mRNA downstream 361598 32270685 ~ 32285936 (-) True AMCG00014813
AMCG00014809 mRNA downstream 678311 31967444 ~ 31969223 (-) True AMCG00014809
AMCG00014818 mRNA upstream 1181 32650176 ~ 32653420 (-) True AMCG00014818
AMCG00014823 mRNA upstream 142886 32791881 ~ 32793425 (-) True AMCG00014823
AMCG00014824 mRNA upstream 146010 32795005 ~ 32806293 (-) False AMCG00014824
AMCG00014825 mRNA upstream 421811 33070806 ~ 33119328 (-) False AMCG00014825
AMCG00014826 mRNA upstream 478683 33127678 ~ 33434382 (-) True AMCG00014826
TU91374 other downstream 28385 32597462 ~ 32619149 (-) False G73127
TU91373 other downstream 32728 32597462 ~ 32614806 (-) True G73127
TU91283 other downstream 384107 32263167 ~ 32263427 (-) True G73047
TU90581 other downstream 3249229 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 4315052 28329739 ~ 28332482 (-) True G72236
TU91480 other upstream 152863 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 2120588 34769583 ~ 34769979 (-) True G73328
TU91914 other upstream 2931631 35580626 ~ 35608677 (-) True AMCG00014839
TU91940 other upstream 3452363 36101358 ~ 36182351 (-) True G73604
TU91951 other upstream 3604779 36253774 ~ 36254187 (-) True G73612

Expression Profile