RNA id: AMCG00014856



Basic Information


Item Value
RNA id AMCG00014856
length 525
RNA type mRNA
GC content 0.55
exon number 2
gene id AMCG00014856
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37068871 ~ 37073768 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCCGATTCCCAGTTAATGTGTATGGACGACGATCATGTCAACCAAAAGATCTCCGAATCCAAGCCAGAGTTCTATTACAGCGAAGAGCAGCGAGGGGCCATTGAGCAGCTCCTCAAGAACGGAGACGGAGCCTTCAAGCTTCGCATCAAGGAGGACAACGTGAAGGAGTTCCTCTCGGCCCGTGAGATCAAGAGGATCCGCCAAACTTTTCAACAGGTTCAAGAGTGCGAATCAGAGGGCGAGGACAAGTCGGAAGGGGATCCGACCGAGTCCAGGTCACATTCGGGGGTCCAGTCCACTTACTGGCCCGAGCTTTCCGACACCGATGTACCGCCGTTGGACATAGGCTGGCCGGACACAGGGTTCTACAGAGGGGTCACCCGAGTGGCGGTCCACACCCACCCACCTAAAGACAACGGTCCGCATATCAAGCAGGTGATTCGGGGATTGATCCAAGAAGCTAAAAAGACCCAAGCCAGCTGGCTCCGACCCCTCCACGCCAGCAATGGAAATGAGGTATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92141 lncRNA downstream 52698 37015950 ~ 37016173 (-) True G73776
TU92083 lncRNA downstream 338310 36689357 ~ 36730561 (-) True G73722
TU92063 lncRNA downstream 416828 36646059 ~ 36652043 (-) True G73704
TU92025 lncRNA downstream 592923 36474243 ~ 36475948 (-) True G73667
TU91948 lncRNA downstream 874621 36194048 ~ 36194250 (-) True G73609
TU92178 lncRNA upstream 99162 37172930 ~ 37173171 (-) True G73803
TU92228 lncRNA upstream 444275 37518043 ~ 37518331 (-) True G73851
TU92230 lncRNA upstream 457702 37531470 ~ 37531976 (-) True G73853
TU92234 lncRNA upstream 499970 37573738 ~ 37574140 (-) True G73857
TU92243 lncRNA upstream 507998 37581766 ~ 37582162 (-) True G73866
AMCG00014855 mRNA downstream 21392 37044210 ~ 37047479 (-) True AMCG00014855
AMCG00014851 mRNA downstream 124132 36931007 ~ 36944739 (-) True AMCG00014851
AMCG00014849 mRNA downstream 264032 36803232 ~ 36804839 (-) True AMCG00014849
AMCG00014846 mRNA downstream 498563 36539818 ~ 36570308 (-) True AMCG00014846
AMCG00014847 mRNA downstream 542061 36464454 ~ 36526810 (-) True AMCG00014847
AMCG00014854 mRNA upstream 6389 37080157 ~ 37115666 (-) True AMCG00014854
AMCG00014858 mRNA upstream 228456 37302224 ~ 37309817 (-) True AMCG00014858
AMCG00014857 mRNA upstream 249974 37323742 ~ 37359709 (-) True AMCG00014857
AMCG00014859 mRNA upstream 343765 37417533 ~ 37421167 (-) True AMCG00014859
AMCG00014861 mRNA upstream 481121 37554889 ~ 37558209 (-) True AMCG00014861
TU92007 other downstream 675378 36373151 ~ 36393493 (-) True AMCG00014845
TU91951 other downstream 814684 36253774 ~ 36254187 (-) True G73612
TU91940 other downstream 886520 36101358 ~ 36182351 (-) True G73604
TU91914 other downstream 1460194 35580626 ~ 35608677 (-) True AMCG00014839
TU91607 other downstream 2298892 34769583 ~ 34769979 (-) True G73328
TU92209 other upstream 251252 37325020 ~ 37325307 (-) True G73833
TU92296 other upstream 705565 37779333 ~ 37783575 (-) True G73916
TU92499 other upstream 1269554 38343322 ~ 38350291 (-) False G74087
TU92533 other upstream 1338392 38412160 ~ 38413231 (-) True G74107
TU92542 other upstream 1358495 38432263 ~ 38432875 (-) True G74115

Expression Profile