RNA id: TU85037


Basic Information

Item Value
RNA id TU85037
length 355
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G68076
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2769838 ~ 2770660 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGAAGGAAGCAGTTAGTAAAGATCGACTTCCTGATATGAAACAACAGCTGGGCctgtataatatttgtattacatctTTCATATTCAAACcacatatattttgtgtgtttactAAAAAAGATCtgcttttaacaaaaaaaaaacattgcatacaAAATTATATCACAGCGACCGCTGTCCCGAGGCGATGCAGACAGTGTAGTCCGGCTGAGGACGGGTGAGCTGCAGTAACGGGCTCACTGTGTGCCCTGTCTGTCTAAAGGGGATGCTGCTGCTGTGGGCCGTGGTTTCAGCGATGCTCCCTGCCAGCGGGTCTGCAGGGGAGAAGTGTGTTATTGGAGTCATTGGAGACTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU85032 lncRNA downstream 3664 2765190 ~ 2766174 (-) False G68073
TU85033 lncRNA downstream 3664 2765190 ~ 2766174 (-) True G68073
TU85029 lncRNA downstream 10998 2758485 ~ 2758840 (-) True G68070
TU85014 lncRNA downstream 59509 2707817 ~ 2710329 (-) True G68061
TU85010 lncRNA downstream 68679 2696808 ~ 2701159 (-) True G68057
TU85038 lncRNA upstream 5599 2776259 ~ 2805164 (-) True G68077
TU85040 lncRNA upstream 11850 2782510 ~ 2785413 (-) True G68078
TU85041 lncRNA upstream 11850 2782510 ~ 2802044 (-) False G68078
TU85111 lncRNA upstream 258449 3029109 ~ 3032764 (-) True G68124
TU85159 lncRNA upstream 456205 3226865 ~ 3228150 (-) True G68162
AMCG00014151 mRNA downstream 17843 2745345 ~ 2751995 (-) True AMCG00014151
AMCG00014150 mRNA downstream 34966 2731531 ~ 2734872 (-) True AMCG00014150
AMCG00014142 mRNA downstream 94428 2667981 ~ 2675410 (-) True AMCG00014142
AMCG00014144 mRNA downstream 116591 2641189 ~ 2653247 (-) True AMCG00014144
AMCG00014145 mRNA downstream 134522 2631658 ~ 2635316 (-) True AMCG00014145
AMCG00014155 mRNA upstream 79752 2850412 ~ 2868349 (-) True AMCG00014155
AMCG00014153 mRNA upstream 99801 2870461 ~ 2879884 (-) True AMCG00014153
AMCG00014156 mRNA upstream 109854 2880514 ~ 2892222 (-) True AMCG00014156
AMCG00014154 mRNA upstream 123194 2893854 ~ 2904687 (-) True AMCG00014154
AMCG00014157 mRNA upstream 159954 2930614 ~ 2935152 (-) True AMCG00014157
TU84998 other downstream 125931 2641059 ~ 2643907 (-) False AMCG00014144
TU84851 other downstream 227141 2540317 ~ 2542697 (-) False AMCG00014134
TU84738 other downstream 851656 1916727 ~ 1918182 (-) True G67843
TU84714 other downstream 867223 1900640 ~ 1902615 (-) True G67832
TU84719 other downstream 877285 1892063 ~ 1892553 (-) True G67835
TU85055 other upstream 54902 2825562 ~ 2829144 (-) True G68088
TU86038 other upstream 4607428 7378088 ~ 7380780 (-) True AMCG00014271
TU86071 other upstream 4646938 7417598 ~ 7423291 (-) False AMCG00014278
TU86293 other upstream 5366671 8137331 ~ 8139126 (-) False AMCG00014297
TU86302 other upstream 5385569 8156229 ~ 8158590 (-) True AMCG00014298

Expression Profile