RNA id: TU85344


Basic Information

Item Value
RNA id TU85344
length 265
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G68304
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3957002 ~ 3957266 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcgagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactccccagcgatgtggctgaagagacaatttgggaacattcaaaaacagactggataggatccttgatcacttagttattaatggacaccaaacgagcacgatggggcgaatgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU85251 lncRNA downstream 492210 3463435 ~ 3464792 (-) True G68224
TU85184 lncRNA downstream 565622 3390988 ~ 3391380 (-) False AMCG00014181
TU85159 lncRNA downstream 728852 3226865 ~ 3228150 (-) True G68162
TU85111 lncRNA downstream 924238 3029109 ~ 3032764 (-) True G68124
TU85041 lncRNA downstream 1154958 2782510 ~ 2802044 (-) False G68078
TU85365 lncRNA upstream 138949 4096215 ~ 4098475 (-) True G68324
TU85366 lncRNA upstream 138949 4096215 ~ 4098475 (-) False G68324
TU85367 lncRNA upstream 142298 4099564 ~ 4099927 (-) True G68325
TU85381 lncRNA upstream 148252 4105518 ~ 4129741 (-) False G68336
TU85386 lncRNA upstream 148252 4105518 ~ 4129741 (-) False G68336
AMCG00014193 mRNA downstream 35687 3914862 ~ 3921315 (-) True AMCG00014193
AMCG00014191 mRNA downstream 125719 3807265 ~ 3831283 (-) True AMCG00014191
AMCG00014189 mRNA downstream 256241 3700069 ~ 3700761 (-) True AMCG00014189
AMCG00014190 mRNA downstream 278746 3657077 ~ 3678256 (-) True AMCG00014190
AMCG00014185 mRNA downstream 383555 3566511 ~ 3573447 (-) True AMCG00014185
AMCG00014203 mRNA upstream 336635 4293901 ~ 4297462 (-) True AMCG00014203
AMCG00014205 mRNA upstream 362928 4320194 ~ 4325828 (-) True AMCG00014205
AMCG00014206 mRNA upstream 425337 4382603 ~ 4382845 (-) True AMCG00014206
AMCG00014204 mRNA upstream 426879 4384145 ~ 4389193 (-) True AMCG00014204
AMCG00014210 mRNA upstream 554555 4511821 ~ 4520399 (-) True AMCG00014210
TU85055 other downstream 1127858 2825562 ~ 2829144 (-) True G68088
TU84998 other downstream 1313095 2641059 ~ 2643907 (-) False AMCG00014144
TU84851 other downstream 1414305 2540317 ~ 2542697 (-) False AMCG00014134
TU84738 other downstream 2038820 1916727 ~ 1918182 (-) True G67843
TU84714 other downstream 2054387 1900640 ~ 1902615 (-) True G67832
TU86038 other upstream 3420822 7378088 ~ 7380780 (-) True AMCG00014271
TU86071 other upstream 3460332 7417598 ~ 7423291 (-) False AMCG00014278
TU86293 other upstream 4180065 8137331 ~ 8139126 (-) False AMCG00014297
TU86302 other upstream 4198963 8156229 ~ 8158590 (-) True AMCG00014298
TU86412 other upstream 4426019 8383285 ~ 8384224 (-) True G69156

Expression Profile