RNA id: TU86202



Basic Information


Item Value
RNA id TU86202
length 206
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G68981
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7874153 ~ 7874358 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCTGTGAGGGGATAACCCCGTCCCGCCACTTTCACCTCCTTCGAGATAACGTCACAGGAAACCAAACCGGAACGCTTTATCTTCCATCGACTCTCCCTCCACGTTAACCGCTCCGATGACGGCGTTCGCTCGGTGCAGCTCGCGATGACAGCCTGCAGAAAATGTGGTAAACAAATTCGGGGCTGGCAAACCAACCTGCGGACTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU86117 lncRNA downstream 247778 7625985 ~ 7626375 (-) True G68905
TU86087 lncRNA downstream 408491 7465409 ~ 7465662 (-) True G68875
TU86086 lncRNA downstream 414264 7455978 ~ 7459889 (-) True G68874
TU86077 lncRNA downstream 432981 7440500 ~ 7441172 (-) True G68867
TU86070 lncRNA downstream 457638 7413729 ~ 7416515 (-) True AMCG00014278
TU86291 lncRNA upstream 260545 8134903 ~ 8136194 (-) True AMCG00014297
TU86331 lncRNA upstream 352136 8226494 ~ 8250561 (-) True G69086
TU86493 lncRNA upstream 1016198 8890556 ~ 8890839 (-) True G69233
TU86513 lncRNA upstream 1124068 8998426 ~ 8998626 (-) True G69250
TU86641 lncRNA upstream 1475430 9349788 ~ 9355238 (-) True G69352
AMCG00014286 mRNA downstream 91151 7752906 ~ 7783002 (-) True AMCG00014286
AMCG00014287 mRNA downstream 122288 7731014 ~ 7751865 (-) True AMCG00014287
AMCG00014284 mRNA downstream 198895 7668553 ~ 7675258 (-) True AMCG00014284
AMCG00014280 mRNA downstream 294053 7569311 ~ 7580100 (-) True AMCG00014280
AMCG00014275 mRNA downstream 438047 7426221 ~ 7436106 (-) True AMCG00014275
AMCG00014291 mRNA upstream 146627 8020985 ~ 8060018 (-) True AMCG00014291
AMCG00014297 mRNA upstream 260864 8135222 ~ 8138788 (-) False AMCG00014297
AMCG00014296 mRNA upstream 267831 8142189 ~ 8147008 (-) True AMCG00014296
AMCG00014295 mRNA upstream 274029 8148387 ~ 8155403 (-) True AMCG00014295
AMCG00014298 mRNA upstream 281574 8155932 ~ 8158488 (-) False AMCG00014298
TU86071 other downstream 450862 7417598 ~ 7423291 (-) False AMCG00014278
TU86038 other downstream 493373 7378088 ~ 7380780 (-) True AMCG00014271
TU85055 other downstream 5045009 2825562 ~ 2829144 (-) True G68088
TU84998 other downstream 5230246 2641059 ~ 2643907 (-) False AMCG00014144
TU84851 other downstream 5331456 2540317 ~ 2542697 (-) False AMCG00014134
TU86293 other upstream 262973 8137331 ~ 8139126 (-) False AMCG00014297
TU86302 other upstream 281871 8156229 ~ 8158590 (-) True AMCG00014298
TU86412 other upstream 508927 8383285 ~ 8384224 (-) True G69156
TU86630 other upstream 1436093 9310451 ~ 9317167 (-) True AMCG00014328
TU86854 other upstream 2922358 10796716 ~ 10798147 (-) True G69537

Expression Profile