RNA id: TU86693



Basic Information


Item Value
RNA id TU86693
length 224
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G69396
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 9935175 ~ 9935398 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAAGTTTTAATCTTATGTGTagtttagtagtagtagtgtatgTAGTTTTCAATCCATTAGTGTATCAGTCCTTCAGTCATTAAAATGTGGGAGAGGGAAATGGTGTGTCGCAGGGGACAAAATTGATGCAGCCTTATCTTTGGCCCATATTCTATCCCTGTTTATTATGTTATCATGACACACTggtctgtgtatatgtatatgtgagtcagtgtgtgtgtgag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU86691 lncRNA downstream 17840 9916845 ~ 9917335 (-) True G69394
TU86687 lncRNA downstream 23154 9901357 ~ 9912021 (-) True G69391
TU86688 lncRNA downstream 23154 9901357 ~ 9912021 (-) False G69391
TU86677 lncRNA downstream 39595 9894726 ~ 9895580 (-) True G69382
TU86668 lncRNA downstream 343794 9591176 ~ 9591381 (-) True G69373
TU86723 lncRNA upstream 80092 10015490 ~ 10017751 (-) False AMCG00014340
TU86727 lncRNA upstream 118339 10053737 ~ 10054275 (-) True G69427
TU86735 lncRNA upstream 122699 10058097 ~ 10061092 (-) False AMCG00014339
TU86736 lncRNA upstream 122699 10058097 ~ 10061092 (-) True AMCG00014339
TU86793 lncRNA upstream 402489 10337887 ~ 10340946 (-) True G69483
AMCG00014332 mRNA downstream 462916 9467324 ~ 9472259 (-) True AMCG00014332
AMCG00014333 mRNA downstream 516939 9373456 ~ 9418236 (-) True AMCG00014333
AMCG00014331 mRNA downstream 568139 9358847 ~ 9367036 (-) True AMCG00014331
AMCG00014328 mRNA downstream 618269 9305239 ~ 9316906 (-) False AMCG00014328
AMCG00014325 mRNA downstream 706548 9216869 ~ 9228627 (-) True AMCG00014325
AMCG00014340 mRNA upstream 65736 10001134 ~ 10017444 (-) True AMCG00014340
AMCG00014341 mRNA upstream 92254 10027652 ~ 10043566 (-) True AMCG00014341
AMCG00014339 mRNA upstream 122870 10058268 ~ 10061230 (-) False AMCG00014339
AMCG00014346 mRNA upstream 257231 10192629 ~ 10197751 (-) True AMCG00014346
AMCG00014348 mRNA upstream 305608 10241006 ~ 10256375 (-) True AMCG00014348
TU86630 other downstream 618008 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 1550951 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 1776585 8156229 ~ 8158590 (-) True AMCG00014298
TU86293 other downstream 1796049 8137331 ~ 8139126 (-) False AMCG00014297
TU86071 other downstream 2511884 7417598 ~ 7423291 (-) False AMCG00014278
TU86854 other upstream 861318 10796716 ~ 10798147 (-) True G69537
TU87063 other upstream 1724623 11660021 ~ 11662493 (-) False AMCG00014374
TU90285 other upstream 18394341 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 19453892 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 22327769 32263167 ~ 32263427 (-) True G73047

Expression Profile