RNA id: TU86811



Basic Information


Item Value
RNA id TU86811
length 250
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G69499
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10493147 ~ 10493396 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ccagatctcaatccaatcgagcatctgtgggatgtgctggacaaacaagtccgatccatggaggccccacctcacaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagcacaccttcagaggtctagtggagtccatgccttgacgggtcagggctgttttggcggcaaaagggggacctacacaatattaggcaggtggtcataatgttatggctgatcggtgtatat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU86759 lncRNA upstream 269112 10223671 ~ 10224035 (+) True G69457
TU86745 lncRNA upstream 341234 10147979 ~ 10151913 (+) True AMCG00014345
TU86731 lncRNA upstream 437414 10055377 ~ 10055733 (+) True G69431
TU86728 lncRNA upstream 438436 10054491 ~ 10054711 (+) True G69428
TU86698 lncRNA upstream 464796 9974424 ~ 10028351 (+) True G69400
TU86857 lncRNA downstream 343808 10837204 ~ 10838230 (+) True G69540
TU86875 lncRNA downstream 465930 10959326 ~ 10961929 (+) True G69556
TU86944 lncRNA downstream 727674 11221070 ~ 11221274 (+) True G69610
TU87041 lncRNA downstream 1147687 11641083 ~ 11641452 (+) True G69681
TU87100 lncRNA downstream 1225922 11719318 ~ 11722767 (+) True G69722
AMCG00014350 mRNA upstream 112726 10352845 ~ 10380421 (+) True AMCG00014350
AMCG00014351 mRNA upstream 175145 10308422 ~ 10318002 (+) True AMCG00014351
AMCG00014352 mRNA upstream 250886 10229000 ~ 10242261 (+) True AMCG00014352
AMCG00014344 mRNA upstream 330982 10156465 ~ 10162165 (+) True AMCG00014344
AMCG00014345 mRNA upstream 342117 10148452 ~ 10151030 (+) False AMCG00014345
AMCG00014357 mRNA downstream 171997 10665393 ~ 10671738 (+) True AMCG00014357
AMCG00014356 mRNA downstream 227688 10721084 ~ 10754147 (+) True AMCG00014356
AMCG00014355 mRNA downstream 273240 10766636 ~ 10801310 (+) True AMCG00014355
AMCG00014362 mRNA downstream 568199 11061595 ~ 11086602 (+) True AMCG00014362
AMCG00014363 mRNA downstream 604171 11097567 ~ 11105850 (+) True AMCG00014363
TU86705 other upstream 484499 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 3076553 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 3143680 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 5841183 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 3843462 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 5182235 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 5182235 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 5636129 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 5972285 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile