RNA id: TU86840


Basic Information

Item Value
RNA id TU86840
length 223
lncRNA type intronic
GC content 0.48
exon number 1
gene id G69523
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10681070 ~ 10681292 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaacttgcttccttctgctctgacaatgttccccaactctgaggattggtttttccagcaggacaatgctccatgccacacagccaggtcaatcaaggtgtggatggaggaccaccagatcaagaccctgtcatggccagcccaatctccagacctgaaccccattgaaaacctctggaatatgatcaagaggaagatggatgatcacaagccatcaaacaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86807 lncRNA downstream 202061 10420180 ~ 10479009 (-) True G69495
TU86793 lncRNA downstream 340124 10337887 ~ 10340946 (-) True G69483
TU86735 lncRNA downstream 619978 10058097 ~ 10061092 (-) False AMCG00014339
TU86736 lncRNA downstream 619978 10058097 ~ 10061092 (-) True AMCG00014339
TU86727 lncRNA downstream 626795 10053737 ~ 10054275 (-) True G69427
TU86845 lncRNA upstream 58124 10739416 ~ 10739930 (-) True G69528
TU86847 lncRNA upstream 85308 10766600 ~ 10768258 (-) True G69530
TU86848 lncRNA upstream 91891 10773183 ~ 10773422 (-) True G69531
TU86849 lncRNA upstream 95759 10777051 ~ 10777441 (-) True G69532
TU86852 lncRNA upstream 111627 10792919 ~ 10793146 (-) True G69535
AMCG00014354 mRNA downstream 154101 10525613 ~ 10526969 (-) True AMCG00014354
AMCG00014347 mRNA downstream 352839 10318244 ~ 10328231 (-) True AMCG00014347
AMCG00014349 mRNA downstream 379709 10300003 ~ 10301361 (-) True AMCG00014349
AMCG00014348 mRNA downstream 424695 10241006 ~ 10256375 (-) True AMCG00014348
AMCG00014346 mRNA downstream 483319 10192629 ~ 10197751 (-) True AMCG00014346
AMCG00014358 mRNA upstream 218716 10900008 ~ 10903196 (-) True AMCG00014358
AMCG00014359 mRNA upstream 279957 10961249 ~ 10974117 (-) True AMCG00014359
AMCG00014360 mRNA upstream 293173 10974465 ~ 10991144 (-) True AMCG00014360
AMCG00014364 mRNA upstream 407455 11088747 ~ 11096433 (-) True AMCG00014364
AMCG00014368 mRNA upstream 423686 11104978 ~ 11121831 (-) True AMCG00014368
TU86630 other downstream 1363903 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 2296846 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 2522480 8156229 ~ 8158590 (-) True AMCG00014298
TU86293 other downstream 2541944 8137331 ~ 8139126 (-) False AMCG00014297
TU86071 other downstream 3257779 7417598 ~ 7423291 (-) False AMCG00014278
TU86854 other upstream 115424 10796716 ~ 10798147 (-) True G69537
TU87063 other upstream 978729 11660021 ~ 11662493 (-) False AMCG00014374
TU90285 other upstream 17648447 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 18707998 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 21581875 32263167 ~ 32263427 (-) True G73047

Expression Profile