RNA id: TU87498



Basic Information


Item Value
RNA id TU87498
length 267
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G70034
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13623115 ~ 13623381 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aaaaattaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccctgtccactgccgaaagcgcctacaatgggcacatgagcatcagaactggaccacagagcaatggaagaaggtggcctggtctgatgaatcacgagttcaaggtgttgacttggcctccaaattccccagatctcaatccaatcgagcatgtgtggg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87421 lncRNA downstream 247236 13304426 ~ 13375879 (-) True G69973
TU87397 lncRNA downstream 320736 13301924 ~ 13302379 (-) True G69950
TU87328 lncRNA downstream 526779 13087608 ~ 13096336 (-) False AMCG00014412
TU87308 lncRNA downstream 536770 13085363 ~ 13086345 (-) True G69896
TU87527 lncRNA upstream 71376 13694757 ~ 13696971 (-) True G70063
TU87569 lncRNA upstream 135845 13759226 ~ 13761420 (-) True G70091
TU87572 lncRNA upstream 146796 13770177 ~ 13772272 (-) True G70094
TU87667 lncRNA upstream 296140 13919521 ~ 13921330 (-) True G70169
TU87744 lncRNA upstream 475983 14099364 ~ 14102156 (-) True G70238
AMCG00014430 mRNA downstream 86746 13531195 ~ 13536369 (-) True AMCG00014430
AMCG00014438 mRNA downstream 95513 13498726 ~ 13527602 (-) True AMCG00014438
AMCG00014432 mRNA downstream 135502 13478348 ~ 13487613 (-) True AMCG00014432
AMCG00014434 mRNA downstream 149944 13443270 ~ 13473171 (-) True AMCG00014434
AMCG00014437 mRNA downstream 214539 13377662 ~ 13408576 (-) True AMCG00014437
AMCG00014429 mRNA upstream 73954 13697335 ~ 13709287 (-) True AMCG00014429
AMCG00014428 mRNA upstream 105322 13728703 ~ 13742819 (-) True AMCG00014428
AMCG00014436 mRNA upstream 161534 13784915 ~ 13790135 (-) True AMCG00014436
AMCG00014435 mRNA upstream 205074 13828455 ~ 13846485 (-) True AMCG00014435
AMCG00014431 mRNA upstream 229781 13853162 ~ 13864850 (-) True AMCG00014431
TU87063 other downstream 1960622 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 2824968 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 4305948 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 5238891 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 5464525 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 14706358 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 15765909 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 18639786 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 18974081 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 18974081 32597462 ~ 32619149 (-) False G73127

Expression Profile