Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU89156 |
| length | 1185 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 6 |
| gene id | G71283 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 19218317 ~ 19222919 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89082 | lncRNA | upstream | 170145 | 19047958 ~ 19048172 (+) | True | G71237 |
| TU89012 | lncRNA | upstream | 316156 | 18901225 ~ 18902161 (+) | True | G71183 |
| TU88954 | lncRNA | upstream | 525684 | 18688548 ~ 18692633 (+) | True | G71136 |
| TU88779 | lncRNA | upstream | 740289 | 18477043 ~ 18478028 (+) | True | G71038 |
| TU88777 | lncRNA | upstream | 749982 | 18465219 ~ 18468335 (+) | True | G71036 |
| TU89246 | lncRNA | downstream | 701983 | 19924902 ~ 19925198 (+) | True | G71362 |
| TU89263 | lncRNA | downstream | 963695 | 20186614 ~ 20186966 (+) | True | G71378 |
| TU89305 | lncRNA | downstream | 1701649 | 20924568 ~ 20924837 (+) | True | G71414 |
| TU89315 | lncRNA | downstream | 2088671 | 21311590 ~ 21312022 (+) | True | G71424 |
| TU89346 | lncRNA | downstream | 2896664 | 22119583 ~ 22122533 (+) | True | G71452 |
| AMCG00014612 | mRNA | upstream | 1984 | 19214276 ~ 19216333 (+) | True | AMCG00014612 |
| AMCG00014613 | mRNA | upstream | 21478 | 19193419 ~ 19196839 (+) | True | AMCG00014613 |
| AMCG00014607 | mRNA | upstream | 27364 | 19184279 ~ 19190953 (+) | True | AMCG00014607 |
| AMCG00014599 | mRNA | upstream | 161854 | 19048293 ~ 19056463 (+) | True | AMCG00014599 |
| AMCG00014598 | mRNA | upstream | 170676 | 19045683 ~ 19047641 (+) | True | AMCG00014598 |
| AMCG00014610 | mRNA | downstream | 862 | 19223781 ~ 19236789 (+) | True | AMCG00014610 |
| AMCG00014608 | mRNA | downstream | 14651 | 19237570 ~ 19252607 (+) | True | AMCG00014608 |
| AMCG00014609 | mRNA | downstream | 62414 | 19285333 ~ 19291750 (+) | True | AMCG00014609 |
| AMCG00014606 | mRNA | downstream | 73497 | 19296416 ~ 19317255 (+) | True | AMCG00014606 |
| AMCG00014611 | mRNA | downstream | 96950 | 19319869 ~ 19330918 (+) | True | AMCG00014611 |
| TU88725 | other | upstream | 943957 | 18271854 ~ 18274360 (+) | True | G71004 |
| TU88601 | other | upstream | 1769864 | 17403511 ~ 17448453 (+) | False | AMCG00014553 |
| TU88385 | other | upstream | 2749204 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
| TU88218 | other | upstream | 3085515 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88058 | other | upstream | 3538529 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU89430 | other | downstream | 3632423 | 22855342 ~ 22855646 (+) | True | G71525 |
| TU90165 | other | downstream | 8612584 | 27835503 ~ 27841871 (+) | True | AMCG00014704 |
| TU90175 | other | downstream | 8645784 | 27868703 ~ 27879800 (+) | True | AMCG00014703 |
| TU90214 | other | downstream | 9079454 | 28302373 ~ 28304073 (+) | True | G72175 |
| TU90740 | other | downstream | 10628531 | 29851450 ~ 29851821 (+) | True | G72605 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00002193 | False | 1139 | mRNA | 0.46 | 6 | NC_007112.7 | 34707932 ~ 34713800 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000049_03864331_03867898.mRNA | True | 922 | mRNA | 0.45 | 6 | CI01000049 | 3864009 ~ 3867967 (-) |
| eurasian perch (Perca fluviatilis) | TU137438 | True | 254 | lncRNA | 0.39 | 2 | NC_053120.1 | 41209660 ~ 41268656 (+) |
| mexican tetra (Astyanax mexicanus) | TU137438 | True | 1247 | lncRNA | 0.47 | 6 | NC_035908.1 | 7435670 ~ 7443615 (-) |
