RNA id: TU90058


Basic Information

Item Value
RNA id TU90058
length 230
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G72049
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 27418816 ~ 27419045 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TAACAGCCTGTGACTGCTGACTATATTCACCTGTGGCAGTGGATGAAGGAACAATGTTTACTTAGCTTATGTTCAGCTTAATTTTAATAACATCACATTTTTAACGTTAGTCTAATCTAATACCGagttttaataattaagtgcCAGTAACAATGTTAGGGAGGAGTGTCACATTCATTTACTTAAGAAATGCACAAGTTAGTAATTAGTAAGGCATCTGATAGTAGTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90042 lncRNA downstream 76066 27335695 ~ 27342750 (-) False AMCG00014692
TU90016 lncRNA downstream 114219 27285420 ~ 27304597 (-) True AMCG00014693
TU89953 lncRNA downstream 486179 26932268 ~ 26932637 (-) True G71961
TU89858 lncRNA downstream 1083816 26334655 ~ 26335000 (-) True G71882
TU89856 lncRNA downstream 1094562 26324038 ~ 26324254 (-) True G71880
TU90102 lncRNA upstream 111251 27530296 ~ 27530643 (-) True G72089
TU90167 lncRNA upstream 417294 27836339 ~ 27837927 (-) True G72139
TU90174 lncRNA upstream 437694 27856739 ~ 27861375 (-) True G72146
TU90346 lncRNA upstream 1159364 28578409 ~ 28578734 (-) True G72280
TU90377 lncRNA upstream 1227450 28646495 ~ 28646811 (-) True G72305
AMCG00014698 mRNA downstream 13897 27397227 ~ 27404919 (-) True AMCG00014698
AMCG00014699 mRNA downstream 32189 27381186 ~ 27386627 (-) True AMCG00014699
AMCG00014700 mRNA downstream 41044 27373072 ~ 27377772 (-) True AMCG00014700
AMCG00014692 mRNA downstream 49289 27337698 ~ 27369527 (-) True AMCG00014692
AMCG00014693 mRNA downstream 114316 27298451 ~ 27304500 (-) False AMCG00014693
AMCG00014695 mRNA upstream 1006 27420051 ~ 27421669 (-) True AMCG00014695
AMCG00014694 mRNA upstream 12206 27431251 ~ 27440929 (-) True AMCG00014694
AMCG00014696 mRNA upstream 22308 27441353 ~ 27466854 (-) True AMCG00014696
AMCG00014697 mRNA upstream 51244 27470289 ~ 27482680 (-) True AMCG00014697
AMCG00014702 mRNA upstream 72983 27492028 ~ 27509142 (-) True AMCG00014702
TU87063 other downstream 15756323 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 16620669 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 18101649 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 19034592 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 19260226 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 910694 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 1970245 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 4844122 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 5178417 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 5178417 32597462 ~ 32619149 (-) False G73127

Expression Profile