RNA id: TU90967



Basic Information


Item Value
RNA id TU90967
length 365
RNA type TUCP
GC content 0.54
exon number 2
gene id G72787
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30990063 ~ 30996363 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


agtcagggtgcccatgctgacccccatccactgccgaaagcgcctacaatgggcatgtgagcatcagaactggaccacggagcaatggaagaaggtggcctggtctgatgaatcacgagttcaaggtgttgacttggcctccaaattccccagatctcaatccaatcgagcatctgtgggatgtgctggccaaacaagtccgatccatggaggccccacctcgcaacctacaggatctgctgctaacattttggtgccagataccacagcacaccttcagaggtctagtggagtccatgcctcgacgggtcagggctgttttggtggcaaaagggggacctacacaatattaggcaggtggtcat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU90963 lncRNA upstream 33779 30955905 ~ 30956284 (+) True G72783
TU90941 lncRNA upstream 143642 30846162 ~ 30846421 (+) True G72769
TU90940 lncRNA upstream 145393 30841560 ~ 30844670 (+) True G72768
TU90938 lncRNA upstream 152894 30836836 ~ 30837169 (+) True G72767
TU90738 lncRNA upstream 1143477 29843467 ~ 29846586 (+) True AMCG00014757
TU90969 lncRNA downstream 7009 31003372 ~ 31003788 (+) True G72789
TU90976 lncRNA downstream 147060 31143423 ~ 31147877 (+) True AMCG00014786
TU90997 lncRNA downstream 281724 31278087 ~ 31282858 (+) False G72815
TU90999 lncRNA downstream 281724 31278087 ~ 31287434 (+) True G72815
TU91052 lncRNA downstream 465783 31462146 ~ 31463811 (+) True G72861
AMCG00014781 mRNA upstream 72497 30907169 ~ 30917566 (+) True AMCG00014781
AMCG00014771 mRNA upstream 138921 30847172 ~ 30851142 (+) True AMCG00014771
AMCG00014777 mRNA upstream 177776 30805623 ~ 30812287 (+) True AMCG00014777
AMCG00014768 mRNA upstream 248919 30728363 ~ 30741144 (+) True AMCG00014768
AMCG00014774 mRNA upstream 279643 30700206 ~ 30710420 (+) True AMCG00014774
AMCG00014784 mRNA downstream 27180 31023543 ~ 31027002 (+) True AMCG00014784
AMCG00014783 mRNA downstream 45528 31041891 ~ 31044741 (+) True AMCG00014783
AMCG00014786 mRNA downstream 149406 31145769 ~ 31146137 (+) False AMCG00014786
AMCG00014787 mRNA downstream 244938 31241301 ~ 31264255 (+) True AMCG00014787
AMCG00014788 mRNA downstream 301387 31297750 ~ 31308262 (+) True AMCG00014788
TU90966 other upstream 9811 30979570 ~ 30980252 (+) True G72786
TU90965 other upstream 11238 30978216 ~ 30978825 (+) True G72785
TU90928 other upstream 184322 30764351 ~ 30805741 (+) False AMCG00014777
TU90740 other upstream 1138242 29851450 ~ 29851821 (+) True G72605
TU90214 other upstream 2685990 28302373 ~ 28304073 (+) True G72175
TU91144 other downstream 720755 31717118 ~ 31754930 (+) True G72925
TU91344 other downstream 1546147 32542510 ~ 32561489 (+) True G73103
TU91511 other downstream 2368392 33364755 ~ 33366100 (+) True G73244
TU91569 other downstream 3242571 34238934 ~ 34239400 (+) True G73292
TU91608 other downstream 3783759 34780122 ~ 34780590 (+) True G73329

Expression Profile