RNA id: TU91074


Basic Information

Item Value
RNA id TU91074
length 435
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G72874
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31515430 ~ 31519932 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGttattgattaaaaacacaccCCACCCTACAAAGCCCTGGAGGGCTATTTAGGCACAAACATTCCATTACAACTGACTTTGACCAGTTTATACATTACAGAATATTTATTATGCACAATGACAGGCTGACGAGGTTTAAATCCCTGCTGAAAAGCAGAACAGAATAAAGGTTTGCTTCCAAACAGTCCACATATTTAGGTCTCCTTCATAATCTTGGTCAGCTTCTGGATCTTGGTTTTCGTAGACATATCTACATACTTATCCCCAATACTGACAATCATTCCTCCAAGGATGAAGTTGATAGTTATTGGGGAGAGCTTCTCTTTTGTCAGAGTGTCATTGAAGGTCTTCTGCTTTATACTGCGCTTGACATGGGGGTTGAGAACAATGCTGGCCATCTTGGGATCCTTCAACAAGGTCTGCAAAGGAGTTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91062 lncRNA downstream 29964 31480848 ~ 31485466 (-) True G72867
TU91063 lncRNA downstream 48374 31466492 ~ 31467056 (-) True G72868
TU91053 lncRNA downstream 51647 31462179 ~ 31463783 (-) True G72862
TU90971 lncRNA downstream 564055 30950110 ~ 30951375 (-) True G72791
TU90970 lncRNA downstream 568087 30946090 ~ 30947343 (-) True G72790
TU91136 lncRNA upstream 177723 31697655 ~ 31698012 (-) True G72919
TU91232 lncRNA upstream 377008 31896940 ~ 31898945 (-) True G73005
TU91282 lncRNA upstream 736223 32256155 ~ 32256775 (-) True G73046
TU91285 lncRNA upstream 745200 32265132 ~ 32265424 (-) True G73049
TU91304 lncRNA upstream 837770 32357702 ~ 32362393 (-) True G73066
AMCG00014796 mRNA downstream 43808 31469559 ~ 31471622 (-) True AMCG00014796
AMCG00014789 mRNA downstream 170000 31337113 ~ 31345430 (-) True AMCG00014789
AMCG00014790 mRNA downstream 222695 31279314 ~ 31292735 (-) True AMCG00014790
AMCG00014791 mRNA downstream 236300 31261716 ~ 31279130 (-) True AMCG00014791
AMCG00014785 mRNA downstream 535553 30952471 ~ 30979877 (-) True AMCG00014785
AMCG00014794 mRNA upstream 9065 31528997 ~ 31578588 (-) True AMCG00014794
AMCG00014795 mRNA upstream 74459 31594391 ~ 31620377 (-) True AMCG00014795
AMCG00014797 mRNA upstream 180695 31700627 ~ 31707522 (-) True AMCG00014797
AMCG00014806 mRNA upstream 249641 31769573 ~ 31789737 (-) True AMCG00014806
AMCG00014809 mRNA upstream 447512 31967444 ~ 31969223 (-) True AMCG00014809
TU90581 other downstream 2117125 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 3182948 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 19852937 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 20717283 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 22198263 9310451 ~ 9317167 (-) True AMCG00014328
TU91283 other upstream 743235 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 1077530 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 1077530 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 1281926 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 3249651 34769583 ~ 34769979 (-) True G73328

Expression Profile