RNA id: TU91322


Basic Information

Item Value
RNA id TU91322
length 355
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G73082
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32430597 ~ 32430951 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cagacagagacatagACAGTGTGAATATGATAAACGCACTATTCAAAATAGGCCTTGTTAAGACCTAGgaccattacatgtatatttaaaaaagacccCCAACCACTACAGGAAGAGCCGACCCATTCACACTCTACAGTtgaccaacaagaacaacaagaacaaccGGTTATGGGcggccttgttgttcagggttttatgggtgtacactttctgacggatatgacgtaggaataattaaggaaataaatctacctaaaatcacgccccccaattatgacgtaggaatattaataagcttagggcatacgtcataacaaaataggccgcgcccaaaaaaccctactatctacta

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91304 lncRNA downstream 68204 32357702 ~ 32362393 (-) True G73066
TU91285 lncRNA downstream 165173 32265132 ~ 32265424 (-) True G73049
TU91282 lncRNA downstream 173822 32256155 ~ 32256775 (-) True G73046
TU91232 lncRNA downstream 531652 31896940 ~ 31898945 (-) True G73005
TU91136 lncRNA downstream 732585 31697655 ~ 31698012 (-) True G72919
TU91351 lncRNA upstream 19471 32450422 ~ 32466416 (-) True G73106
TU91353 lncRNA upstream 24355 32455306 ~ 32555945 (-) False AMCG00014816
TU91358 lncRNA upstream 92287 32523238 ~ 32523802 (-) True G73112
TU91363 lncRNA upstream 138720 32569671 ~ 32574686 (-) True G73117
TU91379 lncRNA upstream 197578 32628529 ~ 32630521 (-) True G73132
AMCG00014814 mRNA downstream 107838 32321974 ~ 32322759 (-) True AMCG00014814
AMCG00014813 mRNA downstream 144661 32270685 ~ 32285936 (-) True AMCG00014813
AMCG00014809 mRNA downstream 461374 31967444 ~ 31969223 (-) True AMCG00014809
AMCG00014806 mRNA downstream 640860 31769573 ~ 31789737 (-) True AMCG00014806
AMCG00014797 mRNA downstream 723075 31700627 ~ 31707522 (-) True AMCG00014797
AMCG00014816 mRNA upstream 71366 32502317 ~ 32555533 (-) True AMCG00014816
AMCG00014820 mRNA upstream 197881 32628832 ~ 32641932 (-) True AMCG00014820
AMCG00014819 mRNA upstream 216583 32647534 ~ 32648995 (-) True AMCG00014819
AMCG00014818 mRNA upstream 219225 32650176 ~ 32653420 (-) True AMCG00014818
AMCG00014823 mRNA upstream 360930 32791881 ~ 32793425 (-) True AMCG00014823
TU91283 other downstream 167170 32263167 ~ 32263427 (-) True G73047
TU90581 other downstream 3032292 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 4098115 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 20768104 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 21632450 10796716 ~ 10798147 (-) True G69537
TU91373 other upstream 166511 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 166511 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 370907 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 2338632 34769583 ~ 34769979 (-) True G73328
TU91914 other upstream 3149675 35580626 ~ 35608677 (-) True AMCG00014839

Expression Profile