RNA id: TU91351


Basic Information

Item Value
RNA id TU91351
length 300
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G73106
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32450422 ~ 32466416 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTAGAAGGTTGtatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatgccagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91322 lncRNA downstream 19471 32430597 ~ 32430951 (-) True G73082
TU91304 lncRNA downstream 88029 32357702 ~ 32362393 (-) True G73066
TU91285 lncRNA downstream 184998 32265132 ~ 32265424 (-) True G73049
TU91282 lncRNA downstream 193647 32256155 ~ 32256775 (-) True G73046
TU91232 lncRNA downstream 551477 31896940 ~ 31898945 (-) True G73005
TU91358 lncRNA upstream 56822 32523238 ~ 32523802 (-) True G73112
TU91363 lncRNA upstream 103255 32569671 ~ 32574686 (-) True G73117
TU91379 lncRNA upstream 162113 32628529 ~ 32630521 (-) True G73132
TU91436 lncRNA upstream 241597 32708013 ~ 32708283 (-) True G73181
TU91437 lncRNA upstream 243428 32709844 ~ 32710115 (-) True G73182
AMCG00014814 mRNA downstream 127663 32321974 ~ 32322759 (-) True AMCG00014814
AMCG00014813 mRNA downstream 164486 32270685 ~ 32285936 (-) True AMCG00014813
AMCG00014809 mRNA downstream 481199 31967444 ~ 31969223 (-) True AMCG00014809
AMCG00014806 mRNA downstream 660685 31769573 ~ 31789737 (-) True AMCG00014806
AMCG00014797 mRNA downstream 742900 31700627 ~ 31707522 (-) True AMCG00014797
AMCG00014816 mRNA upstream 35901 32502317 ~ 32555533 (-) True AMCG00014816
AMCG00014820 mRNA upstream 162416 32628832 ~ 32641932 (-) True AMCG00014820
AMCG00014819 mRNA upstream 181118 32647534 ~ 32648995 (-) True AMCG00014819
AMCG00014818 mRNA upstream 183760 32650176 ~ 32653420 (-) True AMCG00014818
AMCG00014823 mRNA upstream 325465 32791881 ~ 32793425 (-) True AMCG00014823
TU91283 other downstream 186995 32263167 ~ 32263427 (-) True G73047
TU90581 other downstream 3052117 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 4117940 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 20787929 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 21652275 10796716 ~ 10798147 (-) True G69537
TU91373 other upstream 131046 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 131046 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 335442 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 2303167 34769583 ~ 34769979 (-) True G73328
TU91914 other upstream 3114210 35580626 ~ 35608677 (-) True AMCG00014839

Expression Profile