RNA id: TU91366


Basic Information

Item Value
RNA id TU91366
length 433
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G73120
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32575447 ~ 32575879 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atACAAGTGAGTTATATTGAGTAACTAAATGTCATCATATCTTCAGCACCCAGTTTTGGATGGAGCTCCTACACTTGAAGGATGCAGGTTATTTCAATGGCAGCCATGAACAGgagtgttttctgtgctttgcttttgttaacaTCCTCCAAAaggatttaaatgcatacaagcTGCTCTGCAACCAGTACAGAACTAGACCTTAGAGAATGTCAGCTTGTCCATCCGGAATTCCTAATGAGATACTTAACCTGCCACACAtgtccagtttattttttataatacttgACTAAACAAGTGGGGAAACTGTTTCTAATATTAGCTTCTTATAACAaaccaactgaaaacaaactgtcATACCAATGTTCTGttgtagttttttaaatattaatgagtACATccaaattttgttttgttacttattttgttttag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91345 lncRNA upstream 8551 32565793 ~ 32566896 (+) True G73104
TU91348 lncRNA upstream 11108 32558281 ~ 32564339 (+) True G73105
TU91281 lncRNA upstream 318671 32256009 ~ 32256776 (+) True G73045
TU91254 lncRNA upstream 579909 31971985 ~ 31995538 (+) True G73019
TU91250 lncRNA upstream 606242 31967356 ~ 31969205 (+) True G73018
TU91410 lncRNA downstream 96632 32672511 ~ 32681805 (+) True G73158
TU91472 lncRNA downstream 228789 32804668 ~ 32806309 (+) True G73212
TU91485 lncRNA downstream 494124 33070003 ~ 33070214 (+) True G73220
TU91514 lncRNA downstream 879732 33455611 ~ 33456414 (+) True G73247
TU91515 lncRNA downstream 879732 33455611 ~ 33645483 (+) False G73247
AMCG00014815 mRNA upstream 177939 32396687 ~ 32397508 (+) True AMCG00014815
AMCG00014812 mRNA upstream 320156 32242954 ~ 32255291 (+) True AMCG00014812
AMCG00014810 mRNA upstream 561056 32013184 ~ 32014391 (+) True AMCG00014810
AMCG00014811 mRNA upstream 612476 31939553 ~ 31962971 (+) False AMCG00014811
AMCG00014808 mRNA upstream 659609 31896940 ~ 31915838 (+) True AMCG00014808
AMCG00014817 mRNA downstream 77864 32653743 ~ 32663154 (+) True AMCG00014817
AMCG00014821 mRNA downstream 158989 32734868 ~ 32756137 (+) True AMCG00014821
AMCG00014822 mRNA downstream 183086 32758965 ~ 32768979 (+) True AMCG00014822
AMCG00014827 mRNA downstream 1121644 33697523 ~ 33778248 (+) True AMCG00014827
AMCG00014831 mRNA downstream 2115206 34691085 ~ 34931860 (+) True AMCG00014831
TU91344 other upstream 13958 32542510 ~ 32561489 (+) True G73103
TU91144 other upstream 820517 31717118 ~ 31754930 (+) True G72925
TU90967 other upstream 1579084 30990063 ~ 30996363 (+) True G72787
TU90966 other upstream 1595195 30979570 ~ 30980252 (+) True G72786
TU90965 other upstream 1596622 30978216 ~ 30978825 (+) True G72785
TU91511 other downstream 788876 33364755 ~ 33366100 (+) True G73244
TU91569 other downstream 1663055 34238934 ~ 34239400 (+) True G73292
TU91608 other downstream 2204243 34780122 ~ 34780590 (+) True G73329
TU91622 other downstream 2366132 34942011 ~ 34960447 (+) True G73343
TU91690 other downstream 2814755 35390634 ~ 35394649 (+) False AMCG00014836

Expression Profile